Aliases for ENSG00000237609 Gene

Subcategory (RNA class) for ENSG00000237609 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000237609 Gene

  • Novel Transcript 5
  • NONHSAG032855 94
  • HSALNG0133104 169
  • NONHSAG032856 94
  • NONHSAG032857 94
  • Lnc-PSMG1-4 170
  • AF064858.2 5

External Ids for ENSG00000237609 Gene

Previous GeneCards Identifiers for ENSG00000237609 Gene

  • GC21M040400

Summaries for ENSG00000237609 Gene

GeneCards Summary for ENSG00000237609 Gene

ENSG00000237609 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000237609 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000237609 Gene

Genomics for ENSG00000237609 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000237609 Gene

Promoters and enhancers for ENSG00000237609 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J039028 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 -0.7 -673 2.8 SREBF1 MNT SP1 POLR2A CTBP1 PKNOX1 USF1 ZNF592 MLLT1 TEAD1 ENSG00000237609 ENSG00000235888
GH21J039033 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -5.1 -5073 2 FOXA1 MLX RBPJ NR2F1 ATF1 NR2F6 MIXL1 NFYC RAD21 ZNF652 ENSG00000237609 ENSG00000235888
GH21J039020 Enhancer 1.4 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 +6.8 6834 3.6 CTCF MLX RBPJ POLR2A NR2F1 NR2F6 MIXL1 RAD21 ZNF652 RERE LOC102724740 ENSG00000237609 ENSG00000235888
GH21J039038 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -10.8 -10773 4.6 ZSCAN5C FOXA2 NR2F2 RAD21 JUN FOXA1 CTCF RXRA MAX EGR1 ETS2 ENSG00000237609 ENSG00000235888
GH21J039046 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -18.7 -18710 3.2 RFX1 CEBPB ZNF585B RFX3 PKNOX1 STAT1 ZNF146 HMGN1 ENSG00000235888 ENSG00000237609
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000237609 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000237609 Gene

Genomic Locations for ENSG00000237609 Gene
chr21:39,028,536-39,029,128
(GRCh38/hg38)
Size:
593 bases
Orientation:
Minus strand
chr21:40,400,461-40,401,053
(GRCh37/hg19)
Size:
593 bases
Orientation:
Minus strand

Genomic View for ENSG00000237609 Gene

Genes around ENSG00000237609 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000237609 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000237609 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000237609 Gene

Proteins for ENSG00000237609 Gene

Post-translational modifications for ENSG00000237609 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000237609 Gene

Domains & Families for ENSG00000237609 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000237609 Gene

Function for ENSG00000237609 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000237609 Gene

Localization for ENSG00000237609 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000237609 Gene

Pathways & Interactions for ENSG00000237609 Gene

PathCards logo

SuperPathways for ENSG00000237609 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000237609 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000237609 Gene

Drugs & Compounds for ENSG00000237609 Gene

No Compound Related Data Available

Transcripts for ENSG00000237609 Gene

mRNA/cDNA for ENSG00000237609 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(11) RNACentral transcripts :
(9) LNCipedia transcripts :
(7) NONCODE transcripts :
(7) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000237609 Gene

No ASD Table

Relevant External Links for ENSG00000237609 Gene

GeneLoc Exon Structure for
ENSG00000237609

Expression for ENSG00000237609 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000237609 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000237609 Gene

This gene is overexpressed in Kidney - Cortex (x4.5) and Whole Blood (x4.4).
genes like me logo Genes that share expression patterns with ENSG00000237609: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000237609 Gene

Orthologs for ENSG00000237609 Gene

Evolution for ENSG00000237609 Gene

ENSEMBL:
Gene Tree for ENSG00000237609 (if available)
TreeFam:
Gene Tree for ENSG00000237609 (if available)

No data available for Orthologs for ENSG00000237609 Gene

Paralogs for ENSG00000237609 Gene

No data available for Paralogs for ENSG00000237609 Gene

Variants for ENSG00000237609 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000237609 Gene

Disorders for ENSG00000237609 Gene

No disorders were found for ENSG00000237609 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000237609 Gene

Publications for ENSG00000237609 Gene

No publications were found for ENSG00000237609 Gene.

No data available for External Links for ENSG00000237609 Gene

Products for ENSG00000237609 Gene

Sources for ENSG00000237609 Gene