Aliases for ENSG00000237604 Gene

Subcategory (RNA class) for ENSG00000237604 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000237604 Gene

  • Novel Transcript 5
  • NONHSAG033013.2 91
  • HSALNG0133501 164
  • AP001056.1 5
  • Lnc-PWP2-1 165

External Ids for ENSG00000237604 Gene

Previous GeneCards Identifiers for ENSG00000237604 Gene

  • GC21P045595

Summaries for ENSG00000237604 Gene

GeneCards Summary for ENSG00000237604 Gene

ENSG00000237604 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000237604 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000237604 Gene

Genomics for ENSG00000237604 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000237604 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J044169 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -1.8 -1801 7.5 GATAD2A ZBTB33 TFE3 ZNF512 NFKBIZ BACH1 FOXA1 MTA2 RELA RFX1 ENSG00000237604 PWP2 ENSG00000184441 RRP1B PFKL ICOSLG TRPM2 TRAPPC10 PDXK lnc-ICOSLG-13
GH21J044180 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.0 8046 7.4 YBX1 PRDM1 ZNF143 RELA REST TCF12 IKZF2 NRF1 EED RELB PFKL ICOSLG PWP2 TRPM2 PDXK TRAPPC10 ENSG00000237604 LOC105377139 ENSG00000285413 GATD3A
GH21J044178 Enhancer 0.4 FANTOM5 dbSUPER 0.7 +3.2 3209 0.2 ICOSLG TRPM2 PDXK TRAPPC10 ENSG00000237604 LOC105377139 ENSG00000285413 GATD3A
GH21J044190 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 +15.4 15422 1 CTCF RAD21 ICOSLG ENSG00000285413 LOC105377139 ENSG00000237604 GATD3A
GH21J044188 Enhancer 0.5 dbSUPER 0.4 +13.3 13299 1 NR3C1 MYC SAP130 PRDM10 RAD21 L3MBTL2 MLX PWP2 ICOSLG LOC105377139 ENSG00000285413 ENSG00000237604 GATD3A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000237604 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000237604 Gene

Genomic Locations for ENSG00000237604 Gene
chr21:44,175,455-44,189,556
(GRCh38/hg38)
Size:
14,102 bases
Orientation:
Plus strand
chr21:45,595,372-45,596,336
(GRCh37/hg19)
Size:
965 bases
Orientation:
Plus strand

Genomic View for ENSG00000237604 Gene

Genes around ENSG00000237604 on UCSC Golden Path with GeneCards custom track
ENSG00000237604 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000237604 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000237604 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000237604 Gene

Proteins for ENSG00000237604 Gene

Post-translational modifications for ENSG00000237604 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000237604 Gene

Domains & Families for ENSG00000237604 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000237604 Gene

Function for ENSG00000237604 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000237604 Gene

Localization for ENSG00000237604 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000237604 Gene

Pathways & Interactions for ENSG00000237604 Gene

PathCards logo

SuperPathways for ENSG00000237604 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000237604 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000237604 Gene

Drugs & Compounds for ENSG00000237604 Gene

No Compound Related Data Available

Transcripts for ENSG00000237604 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000237604 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004CB67C_9606 lncRNA 821 3

Ensembl: ENST00000411956 (view in UCSC) ,

LNCipedia: lnc-PWP2-1:7,

NONCODE: NONHSAT082490.2,

URS0000D59A24_9606 lncRNA 4129 2

LncBook: HSALNT0274407,

LNCipedia: lnc-PWP2-1:5,

URS0000D5D342_9606 lncRNA 3126 2

LncBook: HSALNT0274408,

LNCipedia: lnc-PWP2-1:4,

URS0000D5CB01_9606 lncRNA 1794 2

LncBook: HSALNT0274406,

LNCipedia: lnc-PWP2-1:3,

URS0000D576EB_9606 lncRNA 855 2

LncBook: HSALNT0274405,

LNCipedia: lnc-PWP2-1:2,

ENSG00000237604 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000237604 Gene

No ASD Table

Relevant External Links for ENSG00000237604 Gene

GeneLoc Exon Structure for
ENSG00000237604

No data available for mRNA/cDNA for ENSG00000237604 Gene

Expression for ENSG00000237604 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000237604 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000237604 Gene

This gene is overexpressed in Spleen (x7.1).
genes like me logo Genes that share expression patterns with ENSG00000237604: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000237604 Gene

Orthologs for ENSG00000237604 Gene

Evolution for ENSG00000237604 Gene

ENSEMBL:
Gene Tree for ENSG00000237604 (if available)
TreeFam:
Gene Tree for ENSG00000237604 (if available)

No data available for Orthologs for ENSG00000237604 Gene

Paralogs for ENSG00000237604 Gene

No data available for Paralogs for ENSG00000237604 Gene

Variants for ENSG00000237604 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000237604 Gene

Disorders for ENSG00000237604 Gene

Additional Disease Information for ENSG00000237604

No disorders were found for ENSG00000237604 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000237604 Gene

Publications for ENSG00000237604 Gene

No publications were found for ENSG00000237604 Gene.

No data available for Mastermind for ENSG00000237604 Gene

Products for ENSG00000237604 Gene

Sources for ENSG00000237604 Gene