Aliases for ENSG00000236892 Gene

Subcategory (RNA class) for ENSG00000236892 Gene

lncRNA

Number of RNA Genes sources:

4 / 14

Aliases for ENSG00000236892 Gene

  • Novel Transcript 5
  • HSALNG0075702 167
  • NONHSAG005038 92
  • Lnc-KLF6-12 168
  • AL357833.1 5
  • Lnc-KLF6-4 168

External Ids for ENSG00000236892 Gene

Previous GeneCards Identifiers for ENSG00000236892 Gene

  • GC10M003574

Summaries for ENSG00000236892 Gene

GeneCards Summary for ENSG00000236892 Gene

ENSG00000236892 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000236892 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000236892 Gene

Genomics for ENSG00000236892 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000236892 Gene

Promoters and enhancers for ENSG00000236892 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J003556 Enhancer 1 FANTOM5 ENCODE 500.7 -0.3 -263 1 ZNF639 ZIC2 ZBTB10 TRIM28 REST RFX1 CUX1 ATF2 ZNF592 ZBTB17 ENSG00000236892 KLF6 piR-48209-043 LOC105376360 lnc-PFKP-29
GH10J003537 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +17.2 17202 2.6 JUND FOS ZNF639 ZIC2 TRIM28 MYC ATF2 ZEB1 OSR2 SIN3A lnc-KLF6-13 ENSG00000236892 LOC105376360 lnc-PFKP-29
GH10J003525 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +28.6 28613 4.6 ZSCAN5C JUND FOS ZNF639 ZNF10 REST JUN ATF2 CTBP1 BCL11A lnc-KLF6-13 ENSG00000236892 LOC105376360 lnc-PFKP-29
GH10J003541 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +13.9 13914 1.6 JUND FOS REST POLR2A MAFK ZSCAN4 STAT3 ENSG00000236892 lnc-KLF6-13 LOC105376360 lnc-PFKP-29
GH10J003547 Enhancer 0.6 Ensembl 0.4 +7.7 7714 1.6 ZNF316 NFE2 FOSL1 FOS POU2F2 NFE2L1 MAFK TCF12 MAFG MAFF ENSG00000229672 ENSG00000236892 lnc-KLF6-13 LOC105376360 lnc-PFKP-29
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000236892 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000236892 Gene

Genomic Locations for ENSG00000236892 Gene
chr10:3,532,094-3,556,314
(GRCh38/hg38)
Size:
24,221 bases
Orientation:
Minus strand
chr10:3,574,286-3,579,223
(GRCh37/hg19)
Size:
4,938 bases
Orientation:
Minus strand

Genomic View for ENSG00000236892 Gene

Genes around ENSG00000236892 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000236892 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000236892 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000236892 Gene

Proteins for ENSG00000236892 Gene

Post-translational modifications for ENSG00000236892 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000236892 Gene

Domains & Families for ENSG00000236892 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000236892 Gene

Function for ENSG00000236892 Gene

Phenotypes From GWAS Catalog for ENSG00000236892 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000236892 Gene

Localization for ENSG00000236892 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000236892 Gene

Pathways & Interactions for ENSG00000236892 Gene

PathCards logo

SuperPathways for ENSG00000236892 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000236892 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000236892 Gene

Drugs & Compounds for ENSG00000236892 Gene

No Compound Related Data Available

Transcripts for ENSG00000236892 Gene

mRNA/cDNA for ENSG00000236892 Gene

11 RNACentral transcripts :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
1 ENA transcripts :
3 LncBook transcripts :
8 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000236892 Gene

No ASD Table

Relevant External Links for ENSG00000236892 Gene

GeneLoc Exon Structure for
ENSG00000236892

Expression for ENSG00000236892 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000236892 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000236892 Gene

This gene is overexpressed in Testis (x45.1) and Brain - Amygdala (x4.4).
genes like me logo Genes that share expression patterns with ENSG00000236892: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000236892 Gene

Orthologs for ENSG00000236892 Gene

Evolution for ENSG00000236892 Gene

ENSEMBL:
Gene Tree for ENSG00000236892 (if available)
TreeFam:
Gene Tree for ENSG00000236892 (if available)

No data available for Orthologs for ENSG00000236892 Gene

Paralogs for ENSG00000236892 Gene

No data available for Paralogs for ENSG00000236892 Gene

Variants for ENSG00000236892 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000236892 Gene

Disorders for ENSG00000236892 Gene

No disorders were found for ENSG00000236892 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000236892 Gene

Publications for ENSG00000236892 Gene

No publications were found for ENSG00000236892 Gene.

No data available for Mastermind for ENSG00000236892 Gene

Products for ENSG00000236892 Gene

Sources for ENSG00000236892 Gene