Aliases for ENSG00000236823 Gene

Subcategory (RNA class) for ENSG00000236823 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000236823 Gene

  • Novel Transcript 5
  • HSALNG0054791 167
  • NONHSAG045305 92
  • AL035691.1 5
  • Lnc-MAS1-1 168

External Ids for ENSG00000236823 Gene

Previous GeneCards Identifiers for ENSG00000236823 Gene

  • GC06P160320

Summaries for ENSG00000236823 Gene

GeneCards Summary for ENSG00000236823 Gene

ENSG00000236823 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000236823 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000236823 Gene

Genomics for ENSG00000236823 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000236823 Gene

Promoters and enhancers for ENSG00000236823 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J159899 Enhancer 0.5 ENCODE 500.7 +1.3 1251 2.3 TCF12 NR3C1 NR2F1 TCF7L2 FOS FOXA1 PKNOX1 CEBPB SP1 ENSG00000236823 MAS1
GH06J159966 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 10.7 +69.9 69883 5.9 ZBTB40 SIN3A NRF1 POLR2G USF1 SP1 GTF2E2 PHF8 ZFX ZIC2 IGF2R lnc-TCP1-6 WTAP LOC729603 MAS1 ENSG00000236823 SLC22A1
GH06J159975 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 10.3 +81.7 81729 9.9 SIN3A USF1 SP1 FOS EP300 ZIC2 ZNF423 TRIM28 RELA MEF2C IGF2R WTAP MAS1 SOD2 ENSG00000236823 SLC22A1 GQ166646
GH06J159988 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 9.9 +90.5 90497 2.3 AFF1 REST ZNF740 MYC CTBP1 HINFP RBM25 RELA NCOR1 NFRKB IGF2R MAS1 WTAP ENSG00000236823 SOD2 SLC22A1 GQ166646
GH06J159996 Enhancer 1.2 Ensembl ENCODE dbSUPER 10.6 +99.6 99615 5.2 PHB2 ZBTB5 ZIC2 TCF7 AFF1 NR3C1 TOE1 MYC TGIF2 CTBP1 IGF2R MAS1 ENSG00000236823 SLC22A1 GQ166646
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000236823 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000236823 Gene

Genomic Locations for ENSG00000236823 Gene
chr6:159,899,186-159,902,510
(GRCh38/hg38)
Size:
3,325 bases
Orientation:
Plus strand
chr6:160,320,218-160,323,542
(GRCh37/hg19)
Size:
3,325 bases
Orientation:
Plus strand

Genomic View for ENSG00000236823 Gene

Genes around ENSG00000236823 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000236823 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000236823 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000236823 Gene

Proteins for ENSG00000236823 Gene

Post-translational modifications for ENSG00000236823 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000236823 Gene

Domains & Families for ENSG00000236823 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000236823 Gene

Function for ENSG00000236823 Gene

Phenotypes From GWAS Catalog for ENSG00000236823 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000236823 Gene

Localization for ENSG00000236823 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000236823 Gene

Pathways & Interactions for ENSG00000236823 Gene

PathCards logo

SuperPathways for ENSG00000236823 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000236823 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000236823 Gene

Drugs & Compounds for ENSG00000236823 Gene

No Compound Related Data Available

Transcripts for ENSG00000236823 Gene

mRNA/cDNA for ENSG00000236823 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000236823 Gene

No ASD Table

Relevant External Links for ENSG00000236823 Gene

GeneLoc Exon Structure for
ENSG00000236823

Expression for ENSG00000236823 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000236823 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000236823 Gene

This gene is overexpressed in Brain - Hippocampus (x15.1), Cervix - Ectocervix (x5.3), Brain - Anterior cingulate cortex (BA24) (x4.5), Brain - Frontal Cortex (BA9) (x4.4), Brain - Cortex (x4.3), and Brain - Amygdala (x4.1).
genes like me logo Genes that share expression patterns with ENSG00000236823: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000236823 Gene

Orthologs for ENSG00000236823 Gene

Evolution for ENSG00000236823 Gene

ENSEMBL:
Gene Tree for ENSG00000236823 (if available)
TreeFam:
Gene Tree for ENSG00000236823 (if available)

No data available for Orthologs for ENSG00000236823 Gene

Paralogs for ENSG00000236823 Gene

No data available for Paralogs for ENSG00000236823 Gene

Variants for ENSG00000236823 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000236823 Gene

Disorders for ENSG00000236823 Gene

No disorders were found for ENSG00000236823 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000236823 Gene

Publications for ENSG00000236823 Gene

No publications were found for ENSG00000236823 Gene.

No data available for Mastermind for ENSG00000236823 Gene

Products for ENSG00000236823 Gene

Sources for ENSG00000236823 Gene