Aliases for ENSG00000236716 Gene

Subcategory (RNA class) for ENSG00000236716 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000236716 Gene

  • Novel Transcript 5
  • NONHSAG005487 94
  • HSALNG0076923 169
  • AL355376.1 5
  • LINC01517 170

External Ids for ENSG00000236716 Gene

Previous GeneCards Identifiers for ENSG00000236716 Gene

  • GC10P029032

Summaries for ENSG00000236716 Gene

GeneCards Summary for ENSG00000236716 Gene

ENSG00000236716 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000236716 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000236716 Gene

Genomics for ENSG00000236716 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000236716 Gene

Promoters and enhancers for ENSG00000236716 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J028743 Enhancer 0.6 Ensembl ENCODE 781.3 +0.4 413 1.7 REST ZNF24 ZNF335 IKZF1 ZMYM3 ENSG00000236716 LINC01517 piR-43105-049 C10orf126 piR-59297-063
GH10J028768 Enhancer 0.8 Ensembl 23.3 +25.1 25056 2 MLX ATF1 MIXL1 ELF3 SP1 TFE3 PPARG HNF1A KAT8 ZNF644 ENSG00000236716 C10orf126 piR-50308-041 RF00026-134 RNU6-270P LINC01517
GH10J028734 Enhancer 1.1 Ensembl ENCODE 15.3 -8.6 -8644 1.8 GTF3C2 SMARCE1 ATF1 CC2D1A HLF L3MBTL2 RAD21 TEAD4 ELF3 SP1 ENSG00000236716 RNU6-270P C10orf126 LYZL1 SVIL-AS1 HSALNG0076923 piR-43105-049
GH10J028760 Enhancer 0.6 Ensembl ENCODE 25.9 +18.7 18684 3.9 ZNF680 ZNF316 SIN3A ZMYM3 RF00026-134 RNU6-270P ENSG00000236716 C10orf126 piR-50308-041 LINC01517
GH10J028737 Enhancer 0.2 Ensembl 5.3 -6.3 -6344 0.8 RNU6-270P C10orf126 ENSG00000236716 piR-43105-049 HSALNG0076923
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000236716 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000236716 Gene

Genomic Locations for ENSG00000236716 Gene
chr10:28,743,745-28,744,663
(GRCh38/hg38)
Size:
919 bases
Orientation:
Plus strand
chr10:29,032,674-29,033,592
(GRCh37/hg19)
Size:
919 bases
Orientation:
Plus strand

Genomic View for ENSG00000236716 Gene

Genes around ENSG00000236716 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000236716 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000236716 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000236716 Gene

Proteins for ENSG00000236716 Gene

Post-translational modifications for ENSG00000236716 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000236716 Gene

Domains & Families for ENSG00000236716 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000236716 Gene

Function for ENSG00000236716 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000236716 Gene

Localization for ENSG00000236716 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000236716 Gene

Pathways & Interactions for ENSG00000236716 Gene

PathCards logo

SuperPathways for ENSG00000236716 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000236716 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000236716 Gene

Drugs & Compounds for ENSG00000236716 Gene

No Compound Related Data Available

Transcripts for ENSG00000236716 Gene

mRNA/cDNA for ENSG00000236716 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(6) RNACentral transcripts :
(6) NONCODE transcripts :
(5) LncBook transcripts :
(5) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000236716 Gene

No ASD Table

Relevant External Links for ENSG00000236716 Gene

GeneLoc Exon Structure for
ENSG00000236716

Expression for ENSG00000236716 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000236716 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000236716 Gene

This gene is overexpressed in Testis (x47.2) and Pancreas (x5.8).
genes like me logo Genes that share expression patterns with ENSG00000236716: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000236716 Gene

Orthologs for ENSG00000236716 Gene

Evolution for ENSG00000236716 Gene

ENSEMBL:
Gene Tree for ENSG00000236716 (if available)
TreeFam:
Gene Tree for ENSG00000236716 (if available)

No data available for Orthologs for ENSG00000236716 Gene

Paralogs for ENSG00000236716 Gene

No data available for Paralogs for ENSG00000236716 Gene

Variants for ENSG00000236716 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000236716 Gene

Disorders for ENSG00000236716 Gene

No disorders were found for ENSG00000236716 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000236716 Gene

Publications for ENSG00000236716 Gene

No publications were found for ENSG00000236716 Gene.

No data available for External Links for ENSG00000236716 Gene

Products for ENSG00000236716 Gene

Sources for ENSG00000236716 Gene