Aliases for ENSG00000236115 Gene

Subcategory (RNA class) for ENSG00000236115 Gene

lncRNA

Number of RNA Genes sources:

4 / 17

Aliases for ENSG00000236115 Gene

  • Novel Transcript 5
  • NONHSAG052842.2 91
  • HSALNG0072758 164
  • Lnc-CENPP-2 165
  • AL136097.2 5

External Ids for ENSG00000236115 Gene

Previous GeneCards Identifiers for ENSG00000236115 Gene

  • GC09P094967
  • GC09P092206
  • GC09P092207

Summaries for ENSG00000236115 Gene

GeneCards Summary for ENSG00000236115 Gene

ENSG00000236115 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000236115 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000236115 Gene

Genomics for ENSG00000236115 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000236115 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J092206 Enhancer 0.5 Ensembl 600.7 +1.4 1445 1.2 ZNF600 RBM22 SUPT5H POLR2A BCL3 ENSG00000236115 LOC112268048 OGN PRSS47 IARS1
GH09J092180 Enhancer 1 Ensembl ENCODE 12.3 -25.1 -25055 4.2 IKZF1 JUND ZIC2 REST NR2C1 ZNF24 HDAC1 MGA CBX3 UBTF CENPP ENSG00000236115 SPTLC1 OGN CARD19 piR-54390-003 lnc-CENPP-8 PRSS47
GH09J092165 Enhancer 0.8 FANTOM5 Ensembl 12.5 -39.6 -39556 4.8 CREB1 ATF7 IKZF2 CBX3 EGR1 TRIM28 USF2 JUNB IRF4 BATF ENSG00000236115 SPTLC1 LINC00475 NOL8 ENSG00000234537 CARD19 BEND3P2 lnc-SPTLC1-5 PRSS47
GH09J092275 Enhancer 0.6 Ensembl 11.6 +71.1 71145 1.8 RBFOX2 CEBPB ZNF316 MAFF MAFK RBM22 WT1 CTCF FOXA1 SUPT5H ENSG00000236115 NOL8 CENPP SPTLC1 lnc-NOL8-2 IARS1 lnc-NOL8-3 PRSS47
GH09J092173 Enhancer 0.4 Ensembl 12.5 -31.2 -31155 0.8 ZNF143 ZNF316 EMSY MAFK ENSG00000236115 SPTLC1 CENPP piR-54390-003 lnc-CENPP-8 PRSS47
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000236115 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000236115 Gene

Genomic Locations for ENSG00000236115 Gene
chr9:92,205,356-92,210,159
(GRCh38/hg38)
Size:
4,804 bases
Orientation:
Plus strand
chr9:94,967,638-94,972,440
(GRCh37/hg19)
Size:
4,803 bases
Orientation:
Plus strand

Genomic View for ENSG00000236115 Gene

Genes around ENSG00000236115 on UCSC Golden Path with GeneCards custom track
ENSG00000236115 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000236115 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000236115 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000236115 Gene

Proteins for ENSG00000236115 Gene

Post-translational modifications for ENSG00000236115 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000236115 Gene

Domains & Families for ENSG00000236115 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000236115 Gene

Function for ENSG00000236115 Gene

Phenotypes From GWAS Catalog for ENSG00000236115 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000236115 Gene

Localization for ENSG00000236115 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000236115 Gene

Pathways & Interactions for ENSG00000236115 Gene

PathCards logo

SuperPathways for ENSG00000236115 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000236115 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000236115 Gene

Drugs & Compounds for ENSG00000236115 Gene

No Compound Related Data Available

Transcripts for ENSG00000236115 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000236115 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001D89C0_9606 lncRNA 333 3

Ensembl: ENST00000457003 (view in UCSC) ,

LNCipedia: lnc-CENPP-2:1,

NONCODE: NONHSAT133181.2,

URS00009B14A2_9606 lncRNA 333 2

LncBook: HSALNT0152123,

NONCODE: NONHSAT219826.1,

URS0001A080FB_9606 lncRNA 289 1

ENA: MN298630.1:1..289:ncRNA,

ENSG00000236115 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000236115 Gene

No ASD Table

Relevant External Links for ENSG00000236115 Gene

GeneLoc Exon Structure for
ENSG00000236115

No data available for mRNA/cDNA for ENSG00000236115 Gene

Expression for ENSG00000236115 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000236115 Gene

genes like me logo Genes that share expression patterns with ENSG00000236115: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000236115 Gene

Orthologs for ENSG00000236115 Gene

Evolution for ENSG00000236115 Gene

ENSEMBL:
Gene Tree for ENSG00000236115 (if available)
TreeFam:
Gene Tree for ENSG00000236115 (if available)

No data available for Orthologs for ENSG00000236115 Gene

Paralogs for ENSG00000236115 Gene

No data available for Paralogs for ENSG00000236115 Gene

Variants for ENSG00000236115 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000236115 Gene

Disorders for ENSG00000236115 Gene

No disorders were found for ENSG00000236115 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000236115 Gene

Publications for ENSG00000236115 Gene

No publications were found for ENSG00000236115 Gene.

No data available for Mastermind for ENSG00000236115 Gene

Products for ENSG00000236115 Gene

Sources for ENSG00000236115 Gene