Aliases for ENSG00000236108 Gene

Aliases for ENSG00000236108 Gene

  • Signal Peptidase 12kDa (SPC12) Pseudogene 5
  • AC093422.3 5

External Ids for ENSG00000236108 Gene

Previous GeneCards Identifiers for ENSG00000236108 Gene

  • GC01P205103

Summaries for ENSG00000236108 Gene

GeneCards Summary for ENSG00000236108 Gene

ENSG00000236108 is a Pseudogene.

Additional gene information for ENSG00000236108 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000236108 Gene

Genomics for ENSG00000236108 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000236108 Gene

Promoters and enhancers for ENSG00000236108 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J204511 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 14.6 -617.6 -617566 11.9 ZNF785 ZNF24 SP1 ZBTB40 SREBF1 ZBTB6 LCORL MLX RBPJ SMARCE1 MDM4 lnc-PIK3C2B-2 ZC3H11A SNRPE PPP1R15B ZBED6 RBBP5 NFASC DSTYK PIK3C2B
GH01J205747 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 14.6 +614.5 614537 5.2 E2F8 SIN3A ZNF24 SP1 ZBTB40 SREBF1 ZBTB6 FOXA1 RBPJ SMARCE1 NUCKS1 ELK4 EIF2D PM20D1 RBBP5 DSTYK RAB29 NFASC ENSG00000234981 ENSG00000225063
GH01J205141 Enhancer 1 Ensembl ENCODE 0.4 +7.2 7155 1.2 CTCF ZNF362 L3MBTL2 MAX RAD21 MNT ZNF148 MAFK SMARCA4 MTA1 DSTYK CNTN2 TMCC2 piR-42952 ENSG00000236108 lnc-CNTN2-3
GH01J205137 Enhancer 0.5 Ensembl ENCODE 0.6 +4.0 3969 1.6 PKNOX1 TRIM28 DSTYK TMCC2 CNTN2 ENSG00000225063 TMEM81 ENSG00000236108 lnc-CNTN2-3 piR-42952
GH01J205124 Enhancer 0.8 FANTOM5 Ensembl 0.4 -9.7 -9745 1.4 SMARCE1 ZBTB33 PKNOX1 DPF2 ZBTB11 FOSL1 EBF1 ATF7 ZNF217 TARDBP TMCC2 TMEM81 lnc-CNTN2-7 ENSG00000236108 lnc-CNTN2-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000236108 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000236108 Gene

Genomic Locations for ENSG00000236108 Gene
chr1:205,134,646-205,134,950
(GRCh38/hg38)
Size:
305 bases
Orientation:
Plus strand
chr1:205,103,774-205,104,078
(GRCh37/hg19)
Size:
305 bases
Orientation:
Plus strand

Genomic View for ENSG00000236108 Gene

Genes around ENSG00000236108 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000236108 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000236108 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000236108 Gene

Proteins for ENSG00000236108 Gene

Post-translational modifications for ENSG00000236108 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000236108 Gene

Domains & Families for ENSG00000236108 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000236108 Gene

Function for ENSG00000236108 Gene

Phenotypes From GWAS Catalog for ENSG00000236108 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000236108 Gene

Localization for ENSG00000236108 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000236108 Gene

Pathways & Interactions for ENSG00000236108 Gene

PathCards logo

SuperPathways for ENSG00000236108 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000236108 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000236108 Gene

Drugs & Compounds for ENSG00000236108 Gene

No Compound Related Data Available

Transcripts for ENSG00000236108 Gene

mRNA/cDNA for ENSG00000236108 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000236108 Gene

No ASD Table

Relevant External Links for ENSG00000236108 Gene

GeneLoc Exon Structure for
ENSG00000236108

Expression for ENSG00000236108 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000236108 Gene

genes like me logo Genes that share expression patterns with ENSG00000236108: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000236108 Gene

Orthologs for ENSG00000236108 Gene

Evolution for ENSG00000236108 Gene

ENSEMBL:
Gene Tree for ENSG00000236108 (if available)
TreeFam:
Gene Tree for ENSG00000236108 (if available)

No data available for Orthologs for ENSG00000236108 Gene

Paralogs for ENSG00000236108 Gene

No data available for Paralogs for ENSG00000236108 Gene

Variants for ENSG00000236108 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000236108 Gene

Disorders for ENSG00000236108 Gene

No disorders were found for ENSG00000236108 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000236108 Gene

Publications for ENSG00000236108 Gene

No publications were found for ENSG00000236108 Gene.

No data available for External Links for ENSG00000236108 Gene

Products for ENSG00000236108 Gene

Sources for ENSG00000236108 Gene