Aliases for ENSG00000235575 Gene

Subcategory (RNA class) for ENSG00000235575 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000235575 Gene

  • Novel Transcript 5
  • NONHSAG003411.2 91
  • HSALNG0008321 164
  • Lnc-BLZF1-1 165
  • Z99758.1 5

External Ids for ENSG00000235575 Gene

Previous GeneCards Identifiers for ENSG00000235575 Gene

  • GC01P169279

Summaries for ENSG00000235575 Gene

GeneCards Summary for ENSG00000235575 Gene

ENSG00000235575 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000235575 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000235575 Gene

Genomics for ENSG00000235575 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000235575 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J169308 Promoter/Enhancer 1.2 Ensembl ENCODE 600.7 -1.3 -1314 1.9 ZNF512 RFX1 LEF1 JUND MTA2 PKNOX1 REST ZNF24 DPF2 HDAC1 ENSG00000235575 NME7 RN7SL333P METTL18 C1orf112 SCYL3 DPT LOC101928596 ATP1B1 lnc-CCDC181-2
GH01J169311 Enhancer 1.1 Ensembl ENCODE 600.7 +1.7 1735 1.2 CREB1 ZNF629 LEF1 ZNF692 JUND PKNOX1 ZNF24 MTA1 REST NR2C1 ENSG00000235575 NME7 CCDC181 piR-58929-007 BLZF1 ATP1B1
GH01J169115 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas dbSUPER 9.9 -194.0 -194018 2.6 GATAD2A ATF7 TFE3 NFKBIZ RCOR2 BACH1 RELA RBFOX2 RXRB IRF2 NME7 LINC00970 ENSG00000235575 ATP1B1 piR-57724 BLZF1
GH01J169338 Enhancer 0.9 Ensembl ENCODE 12 +28.2 28156 0.8 LEF1 ZNF24 DPF2 HDAC1 SOX6 EP300 HMBOX1 NFE2 FOXK2 TCF7 NME7 ENSG00000235575 ATP1B1 LOC101928596 piR-34697-003 piR-43676-003 BLZF1
GH01J169270 Enhancer 0.9 Ensembl ENCODE 11.1 -39.3 -39264 2 CTCF IKZF1 PKNOX1 REST IKZF2 HDAC1 SOX6 FOXJ2 ZNF766 HMBOX1 NME7 ENSG00000235575 CCDC181 piR-47086-018 lnc-CCDC181-2 BLZF1 ATP1B1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000235575 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000235575 Gene

Genomic Locations for ENSG00000235575 Gene
chr1:169,310,665-169,322,479
(GRCh38/hg38)
Size:
11,815 bases
Orientation:
Plus strand
chr1:169,279,903-169,291,717
(GRCh37/hg19)
Size:
11,815 bases
Orientation:
Plus strand

Genomic View for ENSG00000235575 Gene

Genes around ENSG00000235575 on UCSC Golden Path with GeneCards custom track
ENSG00000235575 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000235575 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000235575 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000235575 Gene

Proteins for ENSG00000235575 Gene

Post-translational modifications for ENSG00000235575 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000235575 Gene

Domains & Families for ENSG00000235575 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000235575 Gene

Function for ENSG00000235575 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000235575 Gene

Localization for ENSG00000235575 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000235575 Gene

Pathways & Interactions for ENSG00000235575 Gene

PathCards logo

SuperPathways for ENSG00000235575 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000235575 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000235575 Gene

Drugs & Compounds for ENSG00000235575 Gene

No Compound Related Data Available

Transcripts for ENSG00000235575 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000235575 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000016222F_9606 lncRNA 368 4

Ensembl: ENST00000432081 (view in UCSC) ,

LncBook: HSALNT0017242,

LNCipedia: lnc-BLZF1-1:1,

NONCODE: NONHSAT007460.2,

ENSG00000235575 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000235575 Gene

No ASD Table

Relevant External Links for ENSG00000235575 Gene

GeneLoc Exon Structure for
ENSG00000235575

No data available for mRNA/cDNA for ENSG00000235575 Gene

Expression for ENSG00000235575 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000235575 Gene

genes like me logo Genes that share expression patterns with ENSG00000235575: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000235575 Gene

Orthologs for ENSG00000235575 Gene

Evolution for ENSG00000235575 Gene

ENSEMBL:
Gene Tree for ENSG00000235575 (if available)
TreeFam:
Gene Tree for ENSG00000235575 (if available)

No data available for Orthologs for ENSG00000235575 Gene

Paralogs for ENSG00000235575 Gene

No data available for Paralogs for ENSG00000235575 Gene

Variants for ENSG00000235575 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000235575 Gene

Disorders for ENSG00000235575 Gene

No disorders were found for ENSG00000235575 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000235575 Gene

Publications for ENSG00000235575 Gene

No publications were found for ENSG00000235575 Gene.

No data available for Mastermind for ENSG00000235575 Gene

Products for ENSG00000235575 Gene

Sources for ENSG00000235575 Gene