ENSG00000235070 Gene (RNA Gene)

 

GC02M225681
GIFtS:
8
See more...

Aliases for ENSG00000235070 Gene

Subcategory (RNA class) for ENSG00000235070 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000235070 Gene

  • Novel Transcript 5
  • NONHSAG030677.2 91
  • NONHSAG030681.2 91
  • HSALNG0022673 164
  • AC062015.1 5
  • Lnc-IRS1-2 165

External Ids for ENSG00000235070 Gene

Previous GeneCards Identifiers for ENSG00000235070 Gene

  • GC02M227044
  • GC02M226180

Summaries for ENSG00000235070 Gene

GeneCards Summary for ENSG00000235070 Gene

ENSG00000235070 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000235070 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000235070 Gene

Genomics for ENSG00000235070 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for ENSG00000235070 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH02J226183 Promoter/Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 607.4 -0.7 -679 6.3 REST TOE1 CEBPB SP1 JUND BRCA1 ATF3 JUN USF1 RCOR1 ENSG00000235070 IRS1 HSALNG0022692 NYAP2
GH02J226153 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 6.9 +28.2 28163 8.7 GATAD2A TEAD4 TFE3 SOX13 RCOR2 RBFOX2 POLR2A RXRB SP1 GABPA ENSG00000235070 IRS1 LOC646736 NYAP2
GH02J226135 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 7.7 +48.6 48608 2.7 CREB1 ATF7 JUND CEBPB U2AF2 FOXA2 MAFF MAFK TEAD1 FOSL2 ENSG00000235070 LOC646736 lnc-NYAP2-11 NYAP2 IRS1
GH02J226190 Enhancer 1.1 Ensembl ENCODE dbSUPER 6.3 -5.4 -5393 2 GATAD2A SOX13 RCOR2 RXRB GABPA CEBPA TCF7 SP1 ZBTB26 TGIF2 ENSG00000235070 HSALNG0022692 IRS1 NYAP2
GH02J226211 Enhancer 1.1 Ensembl ENCODE dbSUPER 5.6 -28.1 -28083 5.4 GATAD2A CTCF ZSCAN4 RXRB RAD21 IRF2 TRIM22 CEBPA KMT2B SOX13 ENSG00000235070 HSALNG0022692 piR-36746-014 IRS1 NYAP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000235070 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000235070 Gene

Genomic Locations for ENSG00000235070 Gene
chr2:225,680,550-226,185,618
(GRCh38/hg38)
Size:
505,069 bases
Orientation:
Minus strand
chr2:227,044,760-227,050,087
(GRCh37/hg19)
Size:
5,328 bases
Orientation:
Minus strand

Genomic View for ENSG00000235070 Gene

Genes around ENSG00000235070 on UCSC Golden Path with GeneCards custom track
ENSG00000235070 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000235070 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000235070 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000235070 Gene

Proteins for ENSG00000235070 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000235070 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000235070 Gene

Domains & Families for ENSG00000235070 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000235070 Gene

Function for ENSG00000235070 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000235070 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000235070 Gene

Localization for ENSG00000235070 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000235070 Gene

Pathways & Interactions for ENSG00000235070 Gene

PathCards logo

SuperPathways for ENSG00000235070 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000235070 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000235070 Gene

Drugs & Compounds for ENSG00000235070 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000235070 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000235070 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002A4DCD_9606 lncRNA 1134 3

Ensembl: ENST00000423838 (view in UCSC) ,

LNCipedia: lnc-IRS1-2:1, lnc-IRS1-2:9,

NONCODE: NONHSAT077184.2,

URS00008B9EEF_9606 lncRNA 214 3

LncBook: HSALNT0048076,

LNCipedia: lnc-IRS1-2:11,

NONCODE: NONHSAT077180.2,

URS0000D598AA_9606 lncRNA 1585 2

LncBook: HSALNT0048052,

LNCipedia: lnc-IRS1-2:5,

URS0000D57487_9606 lncRNA 1502 2

LncBook: HSALNT0048051,

LNCipedia: lnc-IRS1-2:10,

URS00009C4A4B_9606 lncRNA 1139 2

LncBook: HSALNT0048107,

NONCODE: NONHSAT186364.1,

ENSG00000235070 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000235070 Gene

No ASD Table

Relevant External Links for ENSG00000235070 Gene

GeneLoc Exon Structure for
ENSG00000235070

No data available for mRNA/cDNA for ENSG00000235070 Gene

Expression for ENSG00000235070 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000235070 Gene

mRNA expression in normal human tissues for ENSG00000235070 Gene
mRNA expression by GTEx for ENSG00000235070 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000235070 Gene

This gene is overexpressed in Thyroid (x33.5) and Muscle - Skeletal (x12.5).
genes like me logo Genes that share expression patterns with ENSG00000235070: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000235070 Gene

Orthologs for ENSG00000235070 Gene

Evolution for ENSG00000235070 Gene

ENSEMBL:
Gene Tree for ENSG00000235070 (if available)
TreeFam:
Gene Tree for ENSG00000235070 (if available)

No data available for Orthologs for ENSG00000235070 Gene

Paralogs for ENSG00000235070 Gene

No data available for Paralogs for ENSG00000235070 Gene

Variants for ENSG00000235070 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000235070 Gene

Disorders for ENSG00000235070 Gene

No disorders were found for ENSG00000235070 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000235070 Gene

Publications for ENSG00000235070 Gene

No publications were found for ENSG00000235070 Gene.

No data available for Mastermind for ENSG00000235070 Gene

Products for ENSG00000235070 Gene

Sources for ENSG00000235070 Gene