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Aliases for ENSG00000235069 Gene

Subcategory (RNA class) for ENSG00000235069 Gene

lncRNA

Aliases for ENSG00000235069 Gene

  • Chromosome 20 Open Reading Frame 52 (C20orf52) Pseudogene 5
  • AL627082.1 5

External Ids for ENSG00000235069 Gene

ORGUL Members for ENSG00000235069 Gene

Previous GeneCards Identifiers for ENSG00000235069 Gene

  • GC01P026974

Summaries for ENSG00000235069 Gene

GeneCards Summary for ENSG00000235069 Gene

ENSG00000235069 is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000235069 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000235069 Gene

Genomics for ENSG00000235069 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000235069 Gene

Promoters and enhancers for ENSG00000235069 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J026647 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 600.7 +1.1 1133 0.8 CREB1 ZBTB33 ATF2 ENSG00000235069 ENSG00000226698 HMGN2 LOC105376888
GH01J026677 Enhancer 1.2 ENCODE dbSUPER 0.3 +30.2 30248 1.2 CC2D1A ELF3 ZNF148 MLLT1 ZNF687 NFIB ZSCAN21 CTCF SP7 SP1 PIGV MIR1976 RPS6KA1 ENSG00000226698 ACTG1P20 NUDC LOC105376888 ENSG00000235069
GH01J026652 Enhancer 0.5 Ensembl 0.4 +5.8 5754 1.6 MCM2 MTA1 MCM7 TSC22D4 MCM3 ZNF366 LARP7 ARID1A GPATCH3 WASF2 NPM1P39 MAP3K6 HMGN2 SFN PIGV ENSG00000226698 ACTG1P20
GH01J026665 Enhancer 0.4 Ensembl 0.4 +17.7 17654 0.2 IKZF1 ZBTB17 ENSG00000226698 RPS6KA1 HMGN2 GPATCH3 NUDC ENSG00000235069 LOC105376888
GH01J026643 Enhancer 0.2 Ensembl 0.7 -3.5 -3546 0.2 ENSG00000238316 RPS6KA1 GPATCH3 NUDC ENSG00000235069
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000235069 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000235069 Gene

Genomic Locations for ENSG00000235069 Gene
chr1:26,647,447-26,647,681
(GRCh38/hg38)
Size:
235 bases
Orientation:
Plus strand
chr1:26,973,938-26,974,172
(GRCh37/hg19)
Size:
235 bases
Orientation:
Plus strand

Genomic View for ENSG00000235069 Gene

Genes around ENSG00000235069 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000235069 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000235069 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000235069 Gene

Proteins for ENSG00000235069 Gene

Post-translational modifications for ENSG00000235069 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000235069 Gene

Domains & Families for ENSG00000235069 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000235069 Gene

Function for ENSG00000235069 Gene

Phenotypes From GWAS Catalog for ENSG00000235069 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000235069 Gene

Localization for ENSG00000235069 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000235069 Gene

Pathways & Interactions for ENSG00000235069 Gene

PathCards logo

SuperPathways for ENSG00000235069 Gene

No Data Available

Interacting Proteins for ENSG00000235069 Gene

Gene Ontology (GO) - Biological Process for ENSG00000235069 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000235069 Gene

Drugs & Compounds for ENSG00000235069 Gene

No Compound Related Data Available

Transcripts for ENSG00000235069 Gene

mRNA/cDNA for ENSG00000235069 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000235069 Gene

No ASD Table

Relevant External Links for ENSG00000235069 Gene

GeneLoc Exon Structure for
ENSG00000235069

Expression for ENSG00000235069 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000235069 Gene

genes like me logo Genes that share expression patterns with ENSG00000235069: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000235069 Gene

Orthologs for ENSG00000235069 Gene

Evolution for ENSG00000235069 Gene

ENSEMBL:
Gene Tree for ENSG00000235069 (if available)
TreeFam:
Gene Tree for ENSG00000235069 (if available)

No data available for Orthologs for ENSG00000235069 Gene

Paralogs for ENSG00000235069 Gene

No data available for Paralogs for ENSG00000235069 Gene

Variants for ENSG00000235069 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000235069 Gene

Disorders for ENSG00000235069 Gene

No disorders were found for ENSG00000235069 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000235069 Gene

Publications for ENSG00000235069 Gene

No publications were found for ENSG00000235069 Gene.

No data available for External Links for ENSG00000235069 Gene

Products for ENSG00000235069 Gene

Sources for ENSG00000235069 Gene

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