Aliases for ENSG00000234389 Gene

Data sources for ENSG00000234389 Gene:

Subcategory (RNA class) for ENSG00000234389 Gene

lncRNA

Aliases for ENSG00000234389 Gene

External Ids for ENSG00000234389 Gene

Previous GeneCards Identifiers for ENSG00000234389 Gene

  • GC02P103055

Summaries for ENSG00000234389 Gene

GeneCards Summary for ENSG00000234389 Gene

ENSG00000234389 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000234389 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000234389 Gene

Genomics for ENSG00000234389 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000234389 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J102436 Enhancer 1 Ensembl ENCODE 304.3 -1.6 -1612 5 BCL11A IKZF1 ZNF395 FOXA2 IRF4 TRIM22 MAFF NBN EBF1 TEAD3 ENSG00000234389 IL18RAP SLC9A4 SLC9A2 IL1R1-AS1 IL18R1 ENSG00000236525
GH02J102416 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE 51.4 -19.1 -19052 6.2 MNT IKZF1 IRF2 HES1 BHLHE40 ARNT ZNF395 GTF2E2 VEZF1 NBN IL18RAP HSALNG0017419 ENSG00000234389 IL1R2 MIR4772 SLC9A4
GH02J102424 Enhancer 0.9 FANTOM5 ENCODE 51.2 -13.3 -13265 1.8 BCL11A IRF4 SPI1 BATF POLR2A MAX IKZF1 CEBPG BACH1 JUNB ENSG00000234389 IL1R2 IL18RAP SLC9A4 IL18R1 IL1R1 HSALNG0017419 MIR4772
GH02J102355 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas 25.8 -81.7 -81727 3.6 BCL11A MXD4 IKZF1 IRF2 CTCF ELF1 NONO THAP11 ZNF513 ZNF395 HSALNG0017416 IL18RAP ENSG00000234389 IL1RL1 lnc-IL1RL1-3 IL18R1
GH02J102399 Enhancer 0.6 Ensembl 51.1 -37.7 -37711 2.4 ZNF395 PKNOX1 CEBPG ATF4 MEIS2 ZNF639 ATF3 ZNF24 TRIM24 FOXJ2 ENSG00000234389 SDR42E1P5 IL18RAP lnc-IL1RL1-3 IL18R1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000234389 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000234389 Gene

Latest Assembly
chr2:102,438,712-102,440,476
(GRCh38/hg38)
Size:
1,765 bases
Orientation:
Plus strand

Previous Assembly
chr2:103,055,173-103,056,935
(GRCh37/hg19 by Ensembl)
Size:
1,763 bases
Orientation:
Plus strand

Genomic View for ENSG00000234389 Gene

Genes around ENSG00000234389 on UCSC Golden Path with GeneCards custom track
ENSG00000234389 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000234389 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000234389 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000234389 Gene

Proteins for ENSG00000234389 Gene

Post-translational modifications for ENSG00000234389 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000234389 Gene

Domains & Families for ENSG00000234389 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000234389 Gene

Function for ENSG00000234389 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000234389 Gene

Localization for ENSG00000234389 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000234389 Gene

Pathways & Interactions for ENSG00000234389 Gene

PathCards logo

SuperPathways for ENSG00000234389 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000234389 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000234389 Gene

Drugs & Compounds for ENSG00000234389 Gene

No Compound Related Data Available

Transcripts for ENSG00000234389 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000234389 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000039A227_9606 lncRNA 1330 4

Ensembl: ENST00000450893 (view in UCSC) ,

LncBook: HSALNT0036680,

LNCipedia: lnc-SLC9A4-1:1,

NONCODE: NONHSAT072862.2,

URS00009BF3EE_9606 lncRNA 1327 2

LncBook: HSALNT0036681,

NONCODE: NONHSAT182282.1,

URS0001BD830B_9606 lncRNA 1327 1

LncBook: HSALNT0036681,

URS0001BEEED6_9606 lncRNA 1327 1

LncBook: HSALNT0036680,

ENSG00000234389 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000234389 Gene

No ASD Table

Relevant External Links for ENSG00000234389 Gene

GeneLoc Exon Structure for
ENSG00000234389

No data available for mRNA/cDNA for ENSG00000234389 Gene

Expression for ENSG00000234389 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000234389 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000234389 Gene

This gene is overexpressed in Whole Blood (x37.3).
genes like me logo Genes that share expression patterns with ENSG00000234389: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000234389 Gene

Orthologs for ENSG00000234389 Gene

Evolution for ENSG00000234389 Gene

ENSEMBL:
Gene Tree for ENSG00000234389 (if available)
TreeFam:
Gene Tree for ENSG00000234389 (if available)

No data available for Orthologs for ENSG00000234389 Gene

Paralogs for ENSG00000234389 Gene

No data available for Paralogs for ENSG00000234389 Gene

Variants for ENSG00000234389 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000234389 Gene

Disorders for ENSG00000234389 Gene

Additional Disease Information for ENSG00000234389

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000234389 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000234389 Gene

Publications for ENSG00000234389 Gene

No publications were found for ENSG00000234389 Gene.

No data available for Mastermind for ENSG00000234389 Gene

Products for ENSG00000234389 Gene

Sources for ENSG00000234389 Gene