Aliases for ENSG00000234318 Gene

Subcategory (RNA class) for ENSG00000234318 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000234318 Gene

  • Novel Transcript 5
  • NONHSAG001686.2 91
  • HSALNG0004086 164
  • Lnc-ATG4C-1 165
  • AC099794.1 5

External Ids for ENSG00000234318 Gene

Previous GeneCards Identifiers for ENSG00000234318 Gene

  • GC01P063361

Summaries for ENSG00000234318 Gene

GeneCards Summary for ENSG00000234318 Gene

ENSG00000234318 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000234318 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000234318 Gene

Genomics for ENSG00000234318 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000234318 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J062882 Enhancer 0.9 UCNEbase Ensembl 0.4 -13.6 -13583 1.1 POLR2A RCOR1 TFAP4 SMARCA4 CHD2 MIXL1 GATA2 EZH2 ATG4C ENSG00000234318 piR-35674-025 FOXD3
GH01J062903 Enhancer 0.8 VISTA UCNEbase 0.4 +8.4 8442 1.5 ZSCAN4 ENSG00000237163 lnc-ATG4C-4 ENSG00000234318 ATG4C FOXD3
GH01J062884 Enhancer 0.8 UCNEbase Ensembl 0.4 -11.8 -11807 1.2 ZNF316 MAFF MAFK MAFG EMSY ENSG00000234318 piR-35674-025 ATG4C FOXD3
GH01J062868 Enhancer 0.9 Ensembl ENCODE 0.3 -26.4 -26360 1.6 TFE3 ZNF7 SP1 CEBPA SOX13 CEBPB FOXA2 YY1 ZBTB33 TEAD1 ATG4C piR-35674-025 ENSG00000234318 FOXD3
GH01J062876 Enhancer 0.5 UCNEbase 0.4 -19.3 -19266 0.2 ZNF316 SP7 ATG4C DOCK7 ENSG00000234318 piR-35674-025 FOXD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000234318 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000234318 Gene

Genomic Locations for ENSG00000234318 Gene
chr1:62,896,009-62,901,640
(GRCh38/hg38)
Size:
5,632 bases
Orientation:
Plus strand
chr1:63,361,680-63,367,310
(GRCh37/hg19)
Size:
5,631 bases
Orientation:
Plus strand

Genomic View for ENSG00000234318 Gene

Genes around ENSG00000234318 on UCSC Golden Path with GeneCards custom track
ENSG00000234318 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000234318 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000234318 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000234318 Gene

Proteins for ENSG00000234318 Gene

Post-translational modifications for ENSG00000234318 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000234318 Gene

Domains & Families for ENSG00000234318 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000234318 Gene

Function for ENSG00000234318 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000234318 Gene

Localization for ENSG00000234318 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000234318 Gene

Pathways & Interactions for ENSG00000234318 Gene

PathCards logo

SuperPathways for ENSG00000234318 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000234318 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000234318 Gene

Drugs & Compounds for ENSG00000234318 Gene

No Compound Related Data Available

Transcripts for ENSG00000234318 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000234318 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000097D6A_9606 lncRNA 447 3

Ensembl: ENST00000450811 (view in UCSC) ,

LNCipedia: lnc-ATG4C-1:1,

NONCODE: NONHSAT003645.2,

URS00009BC429_9606 lncRNA 447 2

LncBook: HSALNT0008045,

NONCODE: NONHSAT149078.1,

ENSG00000234318 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000234318 Gene

No ASD Table

Relevant External Links for ENSG00000234318 Gene

GeneLoc Exon Structure for
ENSG00000234318

No data available for mRNA/cDNA for ENSG00000234318 Gene

Expression for ENSG00000234318 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000234318 Gene

genes like me logo Genes that share expression patterns with ENSG00000234318: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000234318 Gene

Orthologs for ENSG00000234318 Gene

Evolution for ENSG00000234318 Gene

ENSEMBL:
Gene Tree for ENSG00000234318 (if available)
TreeFam:
Gene Tree for ENSG00000234318 (if available)

No data available for Orthologs for ENSG00000234318 Gene

Paralogs for ENSG00000234318 Gene

No data available for Paralogs for ENSG00000234318 Gene

Variants for ENSG00000234318 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000234318 Gene

Disorders for ENSG00000234318 Gene

No disorders were found for ENSG00000234318 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000234318 Gene

Publications for ENSG00000234318 Gene

No publications were found for ENSG00000234318 Gene.

No data available for Mastermind for ENSG00000234318 Gene

Products for ENSG00000234318 Gene

Sources for ENSG00000234318 Gene