Aliases for ENSG00000234162 Gene

Subcategory (RNA class) for ENSG00000234162 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000234162 Gene

  • Novel Transcript, Antisense To NCK2 5
  • NONHSAG028827 92
  • AC009505.1 5
  • Lnc-UXS1-1 168

External Ids for ENSG00000234162 Gene

Previous GeneCards Identifiers for ENSG00000234162 Gene

  • GC02M106575
  • GC02M105959

Summaries for ENSG00000234162 Gene

GeneCards Summary for ENSG00000234162 Gene

ENSG00000234162 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000234162 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000234162 Gene

Genomics for ENSG00000234162 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000234162 Gene

Promoters and enhancers for ENSG00000234162 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J105960 Enhancer 0.8 Ensembl ENCODE 500.7 +1.0 985 2.4 HDAC2 RBM25 POLR2A YY1 TCF12 NR2F1 JUN NR2F6 TAF1 HLF ENSG00000234162 ECRG4 LOC105373531
GH02J105933 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.3 +27.7 27666 1.6 KDM6A TCF7 TEAD1 KLF9 FOXA2 MAFF CREM SMAD4 ZNF511 BCL6 NCK2 LOC105373530 lnc-UXS1-2 ENSG00000234162
GH02J105968 Enhancer 0.8 ENCODE 0.4 -6.4 -6433 1.4 ZBTB11 CTBP1 CTCF ZNF316 GABPA NCOR1 MAX NFE2 FOSL1 JUND piR-38083 ENSG00000234162 LOC105373531
GH02J105917 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.3 +44.8 44798 5.6 EP300 CTCF POLR2G NCOR1 KDM6A ZBTB25 TGIF2 ZBTB7A SKI TEAD1 ENSG00000235522 ECRG4 lnc-NCK2-1 lnc-UXS1-2 ENSG00000234162
GH02J105910 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.2 +51.4 51351 1 TCF7 TGIF2 TEAD1 FOXA2 CEBPB TFDP1 SAP130 MBD1 MIER3 SMAD4 lnc-NCK2-1 lnc-UXS1-2 ENSG00000234162
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000234162 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000234162 Gene

Genomic Locations for ENSG00000234162 Gene
chr2:105,874,509-105,962,386
(GRCh38/hg38)
Size:
87,878 bases
Orientation:
Minus strand
chr2:106,575,540-106,578,462
(GRCh37/hg19)
Size:
2,923 bases
Orientation:
Minus strand

Genomic View for ENSG00000234162 Gene

Genes around ENSG00000234162 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000234162 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000234162 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000234162 Gene

Proteins for ENSG00000234162 Gene

Post-translational modifications for ENSG00000234162 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000234162 Gene

Domains & Families for ENSG00000234162 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000234162 Gene

Function for ENSG00000234162 Gene

Phenotypes From GWAS Catalog for ENSG00000234162 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000234162 Gene

Localization for ENSG00000234162 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000234162 Gene

Pathways & Interactions for ENSG00000234162 Gene

PathCards logo

SuperPathways for ENSG00000234162 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000234162 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000234162 Gene

Drugs & Compounds for ENSG00000234162 Gene

No Compound Related Data Available

Transcripts for ENSG00000234162 Gene

mRNA/cDNA for ENSG00000234162 Gene

5 RNACentral transcripts :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000234162 Gene

No ASD Table

Relevant External Links for ENSG00000234162 Gene

GeneLoc Exon Structure for
ENSG00000234162

Expression for ENSG00000234162 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000234162 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000234162 Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with ENSG00000234162: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000234162 Gene

Orthologs for ENSG00000234162 Gene

Evolution for ENSG00000234162 Gene

ENSEMBL:
Gene Tree for ENSG00000234162 (if available)
TreeFam:
Gene Tree for ENSG00000234162 (if available)

No data available for Orthologs for ENSG00000234162 Gene

Paralogs for ENSG00000234162 Gene

No data available for Paralogs for ENSG00000234162 Gene

Variants for ENSG00000234162 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000234162 Gene

Disorders for ENSG00000234162 Gene

No disorders were found for ENSG00000234162 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000234162 Gene

Publications for ENSG00000234162 Gene

No publications were found for ENSG00000234162 Gene.

No data available for Mastermind for ENSG00000234162 Gene

Products for ENSG00000234162 Gene

Sources for ENSG00000234162 Gene