Aliases for ENSG00000233850 Gene

Subcategory (RNA class) for ENSG00000233850 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000233850 Gene

  • Novel Transcript 5
  • HSALNG0016918 169
  • NONHSAG028560 94
  • Lnc-MRPS5-2 170
  • AC103563.7 5

External Ids for ENSG00000233850 Gene

Previous GeneCards Identifiers for ENSG00000233850 Gene

  • GC02M095690

Summaries for ENSG00000233850 Gene

GeneCards Summary for ENSG00000233850 Gene

ENSG00000233850 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000233850 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000233850 Gene

Genomics for ENSG00000233850 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000233850 Gene

Promoters and enhancers for ENSG00000233850 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J095022 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 750.6 +1.6 1608 5 ZNF24 CTCF RAD21 MLLT1 ZSCAN21 PRDM10 BACH1 TRIM22 LARP7 ZBTB20 MAL ENSG00000233850 NONHSAG028561.2 CYP4F32P GPAT2P1 KCNIP3 TRIM43B RF00017-3264 RN7SL575P lnc-MRPS5-5
GH02J095031 Promoter/Enhancer 0.5 Ensembl dbSUPER 750.6 -1.5 -1492 0.4 ENSG00000233850 lnc-ZNF2-2 MAL NONHSAG028561.2
GH02J095050 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.6 -30.7 -30687 13.2 RBPJ RELA HLF RAD21 NFIB CTCF AHR NCOA3 MLLT1 ZNF687 HSALNG0016921 KCNIP3 ZNF514 ENSG00000233850 MAL GPAT2P1 PROM2 ENSG00000231062 NONHSAG028561.2
GH02J095068 Enhancer 0.6 dbSUPER 12.1 -42.7 -42653 2 ELF3 ZNF560 ZBTB8A RXRB ZNF140 ZNF623 ZC3H11A ZFP64 ZNF664 THRB ZNF514 KCNIP3 MAL ENSG00000233850 GPAT2P1 ENSG00000287362 HSALNG0016925 HSALNG0016921
GH02J095004 Enhancer 0.5 Ensembl ENCODE dbSUPER 12.7 +21.6 21608 1.8 RF00017-3264 RN7SL575P lnc-MRPS5-5 ENSG00000233850 MAL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000233850 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000233850 Gene

Genomic Locations for ENSG00000233850 Gene
chr2:95,025,193-95,026,709
(GRCh38/hg38)
Size:
1,517 bases
Orientation:
Minus strand
chr2:95,690,938-95,692,454
(GRCh37/hg19)
Size:
1,517 bases
Orientation:
Minus strand

Genomic View for ENSG00000233850 Gene

Genes around ENSG00000233850 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000233850 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000233850 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000233850 Gene

Proteins for ENSG00000233850 Gene

Post-translational modifications for ENSG00000233850 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000233850 Gene

Domains & Families for ENSG00000233850 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000233850 Gene

Function for ENSG00000233850 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000233850 Gene

Localization for ENSG00000233850 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000233850 Gene

Pathways & Interactions for ENSG00000233850 Gene

PathCards logo

SuperPathways for ENSG00000233850 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000233850 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000233850 Gene

Drugs & Compounds for ENSG00000233850 Gene

No Compound Related Data Available

Transcripts for ENSG00000233850 Gene

mRNA/cDNA for ENSG00000233850 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) RNACentral transcripts :
(3) LNCipedia transcripts :
(2) NONCODE transcripts :
(2) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000233850 Gene

No ASD Table

Relevant External Links for ENSG00000233850 Gene

GeneLoc Exon Structure for
ENSG00000233850

Expression for ENSG00000233850 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000233850 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000233850 Gene

This gene is overexpressed in Esophagus - Mucosa (x5.9), Kidney - Cortex (x4.7), and Brain - Spinal cord (cervical c-1) (x4.5).
genes like me logo Genes that share expression patterns with ENSG00000233850: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000233850 Gene

Orthologs for ENSG00000233850 Gene

Evolution for ENSG00000233850 Gene

ENSEMBL:
Gene Tree for ENSG00000233850 (if available)
TreeFam:
Gene Tree for ENSG00000233850 (if available)

No data available for Orthologs for ENSG00000233850 Gene

Paralogs for ENSG00000233850 Gene

No data available for Paralogs for ENSG00000233850 Gene

Variants for ENSG00000233850 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000233850 Gene

Disorders for ENSG00000233850 Gene

No disorders were found for ENSG00000233850 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000233850 Gene

Publications for ENSG00000233850 Gene

No publications were found for ENSG00000233850 Gene.

No data available for External Links for ENSG00000233850 Gene

Products for ENSG00000233850 Gene

Sources for ENSG00000233850 Gene