Aliases for ENSG00000233825 Gene

Subcategory (RNA class) for ENSG00000233825 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000233825 Gene

  • Novel Transcript, Antisense To EPC1 5
  • HSALNG0077138 167
  • NONHSAG005570 92
  • AL391839.2 5

External Ids for ENSG00000233825 Gene

Previous GeneCards Identifiers for ENSG00000233825 Gene

  • GC10P032635

Summaries for ENSG00000233825 Gene

GeneCards Summary for ENSG00000233825 Gene

ENSG00000233825 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000233825 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000233825 Gene

Genomics for ENSG00000233825 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000233825 Gene

Promoters and enhancers for ENSG00000233825 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J032344 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +0.0 2 4.6 RXRA EP300 FOXK2 CTCF SIN3A NRF1 TCF12 MYC USF1 POLR2G EPC1 ENSG00000229327 ENSG00000233825 LOC102031319 lnc-KIF5B-5 ENSG00000226842 AK3P5 RPS4XP11 CCDC7
GH10J032331 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 -13.5 -13477 2.4 SIN3A SP1 EP300 ZIC2 TRIM28 RELA MYC RCOR1 TRIM22 POLR2A lnc-CCDC7-12 EPC1 CCDC7 ARHGAP12 ENSG00000233825
GH10J032336 Enhancer 0.7 dbSUPER 0.4 -8.8 -8753 2.4 JUND ZNF662 ATF2 POLR2A OSR2 CREB1 ZBTB17 EHMT2 ZNF513 BATF ENSG00000226842 CCDC7 ENSG00000233825 lnc-CCDC7-12 EPC1
GH10J032339 Enhancer 0.3 dbSUPER 0.4 -5.4 -5396 3.9 ZNF24 POLR2A CCDC7 ENSG00000273038 ENSG00000233825 lnc-CCDC7-12 EPC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000233825 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000233825 Gene

Genomic Locations for ENSG00000233825 Gene
chr10:32,346,499-32,347,179
(GRCh38/hg38)
Size:
681 bases
Orientation:
Plus strand
chr10:32,635,427-32,636,107
(GRCh37/hg19)
Size:
681 bases
Orientation:
Plus strand

Genomic View for ENSG00000233825 Gene

Genes around ENSG00000233825 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000233825 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000233825 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000233825 Gene

Proteins for ENSG00000233825 Gene

Post-translational modifications for ENSG00000233825 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000233825 Gene

Domains & Families for ENSG00000233825 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000233825 Gene

Function for ENSG00000233825 Gene

Phenotypes From GWAS Catalog for ENSG00000233825 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000233825 Gene

Localization for ENSG00000233825 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000233825 Gene

Pathways & Interactions for ENSG00000233825 Gene

PathCards logo

SuperPathways for ENSG00000233825 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000233825 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000233825 Gene

Drugs & Compounds for ENSG00000233825 Gene

No Compound Related Data Available

Transcripts for ENSG00000233825 Gene

mRNA/cDNA for ENSG00000233825 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000233825 Gene

No ASD Table

Relevant External Links for ENSG00000233825 Gene

GeneLoc Exon Structure for
ENSG00000233825

Expression for ENSG00000233825 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000233825 Gene

genes like me logo Genes that share expression patterns with ENSG00000233825: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000233825 Gene

Orthologs for ENSG00000233825 Gene

Evolution for ENSG00000233825 Gene

ENSEMBL:
Gene Tree for ENSG00000233825 (if available)
TreeFam:
Gene Tree for ENSG00000233825 (if available)

No data available for Orthologs for ENSG00000233825 Gene

Paralogs for ENSG00000233825 Gene

No data available for Paralogs for ENSG00000233825 Gene

Variants for ENSG00000233825 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000233825 Gene

Disorders for ENSG00000233825 Gene

No disorders were found for ENSG00000233825 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000233825 Gene

Publications for ENSG00000233825 Gene

No publications were found for ENSG00000233825 Gene.

No data available for Mastermind for ENSG00000233825 Gene

Products for ENSG00000233825 Gene

Sources for ENSG00000233825 Gene