Aliases for ENSG00000233799 Gene

Subcategory (RNA class) for ENSG00000233799 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000233799 Gene

  • Novel Transcript, Antisense To PCGF3 5
  • NONHSAG037226.2 91
  • HSALNG0032188 164
  • Lnc-CPLX1-3 165
  • AC139887.1 5

External Ids for ENSG00000233799 Gene

Previous GeneCards Identifiers for ENSG00000233799 Gene

  • GC04M000758
  • GC04M000775
  • GC04M000790

Summaries for ENSG00000233799 Gene

GeneCards Summary for ENSG00000233799 Gene

ENSG00000233799 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000233799 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000233799 Gene

Genomics for ENSG00000233799 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000233799 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J000765 Enhancer 1.1 Ensembl ENCODE dbSUPER 600.7 -1.2 -1223 2.6 PRDM10 ZNF24 CTCF POLR2A ZNF600 SOX6 ZNF341 SCRT2 MGA CEBPB ENSG00000233799 LOC107986211 MN298081 PCGF3 UVSSA PIGG ENSG00000272588 ENSG00000281016 ZNF718 ENSG00000248416
GH04J001719 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 9.8 -957.1 -957104 5.6 ARHGAP35 SP1 HNRNPL CREB1 SIX5 POLR2A LARP7 ZNF143 ZIC2 RBFOX2 TMEM129 TACC3 piR-50596 ENSG00000207009 FAM53A SLBP ENSG00000233799 piR-57460-497 FGFR3
GH04J001572 Enhancer 0.9 Ensembl ENCODE 9.8 -807.4 -807426 1.4 ARHGAP35 PRDM1 ZSCAN4 PKNOX1 POLR2A ZNF24 ZNF600 SOX6 SCRT2 ZBTB20 RNF4 NELFA FAM193A HAUS3 PDE6B FAM53A CTBP1-DT ENSG00000233799 ENSG00000207009 FGFR3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000233799 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000233799 Gene

Genomic Locations for ENSG00000233799 Gene
chr4:764,487-765,075
(GRCh38/hg38)
Size:
589 bases
Orientation:
Minus strand
chr4:758,275-758,862
(GRCh37/hg19)
Size:
588 bases
Orientation:
Minus strand

Genomic View for ENSG00000233799 Gene

Genes around ENSG00000233799 on UCSC Golden Path with GeneCards custom track
ENSG00000233799 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000233799 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000233799 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000233799 Gene

Proteins for ENSG00000233799 Gene

Post-translational modifications for ENSG00000233799 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000233799 Gene

Domains & Families for ENSG00000233799 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000233799 Gene

Function for ENSG00000233799 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000233799 Gene

Localization for ENSG00000233799 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000233799 Gene

Pathways & Interactions for ENSG00000233799 Gene

PathCards logo

SuperPathways for ENSG00000233799 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000233799 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000233799 Gene

Drugs & Compounds for ENSG00000233799 Gene

No Compound Related Data Available

Transcripts for ENSG00000233799 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000233799 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000073CF9_9606 lncRNA 286 4

Ensembl: ENST00000454037 (view in UCSC) ,

LncBook: HSALNT0067832,

LNCipedia: lnc-CPLX1-3:1,

NONCODE: NONHSAT094613.2,

URS00009B29EE_9606 lncRNA 286 2

LncBook: HSALNT0067833,

NONCODE: NONHSAT199627.1,

ENSG00000233799 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000233799 Gene

No ASD Table

Relevant External Links for ENSG00000233799 Gene

GeneLoc Exon Structure for
ENSG00000233799

No data available for mRNA/cDNA for ENSG00000233799 Gene

Expression for ENSG00000233799 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000233799 Gene

genes like me logo Genes that share expression patterns with ENSG00000233799: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000233799 Gene

Orthologs for ENSG00000233799 Gene

Evolution for ENSG00000233799 Gene

ENSEMBL:
Gene Tree for ENSG00000233799 (if available)
TreeFam:
Gene Tree for ENSG00000233799 (if available)

No data available for Orthologs for ENSG00000233799 Gene

Paralogs for ENSG00000233799 Gene

No data available for Paralogs for ENSG00000233799 Gene

Variants for ENSG00000233799 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000233799 Gene

Disorders for ENSG00000233799 Gene

Additional Disease Information for ENSG00000233799

No disorders were found for ENSG00000233799 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000233799 Gene

Publications for ENSG00000233799 Gene

No publications were found for ENSG00000233799 Gene.

No data available for Mastermind for ENSG00000233799 Gene

Products for ENSG00000233799 Gene

Sources for ENSG00000233799 Gene