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Aliases for ENSG00000233538 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000233538 Gene

  • AC017104.3 5

External Ids for ENSG00000233538 Gene

Previous GeneCards Identifiers for ENSG00000233538 Gene

  • GC02P232316

Summaries for ENSG00000233538 Gene

GeneCards Summary for ENSG00000233538 Gene

ENSG00000233538 is an RNA Gene.

Additional gene information for ENSG00000233538 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000233538 Gene

Genomics for ENSG00000233538 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000233538 Gene

Promoters and enhancers for ENSG00000233538 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I231451 Enhancer 0.8 ENCODE 550.8 +0.7 742 2.5 ELF3 HNRNPUL1 PKNOX1 FOXA2 SMAD1 KLF17 BMI1 ZNF2 ZNF48 RAD21 ENSG00000233538 DIS3L2 RPL28P2 LOC101928816 NMUR1 PIR47677 NCL
GH02I231407 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.6 -40.7 -40746 9.3 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 ZNF48 YY1 ZNF280A GLIS2 B3GNT7 ARMC9 ENSG00000233538 SNORA75 SNORD20 HTR2B NCL RNU2-22P PSMD1 ENSG00000224376
GH02I231189 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.4 -260.7 -260721 3.9 CTCF PKNOX1 SAP130 ARID4B CEBPG DMAP1 ZNF48 ZSCAN9 RAD21 ZNF335 HTR2B ARMC9 ENSG00000233538 SNORA75 SNORD20 RNU2-22P RNU1-93P
GH02I231226 Enhancer 1.3 Ensembl ENCODE dbSUPER 11.2 -223.7 -223739 3 PKNOX1 ARID4B SIN3A ZNF2 IRF4 ZNF143 ATF7 RUNX3 RXRA SP5 HTR2B ARMC9 ENSG00000233538 SNORA75 SNORD20 NCL RNU2-22P GC02P231258 GC02P231266 GC02P231268
GH02I231219 Enhancer 1.2 Ensembl ENCODE dbSUPER 11 -230.0 -230005 4.6 PKNOX1 CLOCK SMAD1 ARNT BMI1 BATF KLF5 ZBTB40 ZNF121 ATF7 ARMC9 HTR2B ENSG00000233538 SNORA75 SNORD20 PSMD1 RNU2-22P GC02P231258 GC02P231266 GC02P231268
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000233538 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000233538 Gene

Genomic Locations for ENSG00000233538 Gene
chr2:231,452,195-231,453,153
(GRCh38/hg38)
Size:
959 bases
Orientation:
Plus strand
chr2:232,316,906-232,317,864
(GRCh37/hg19)

Genomic View for ENSG00000233538 Gene

Genes around ENSG00000233538 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000233538 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000233538 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000233538 Gene

Proteins for ENSG00000233538 Gene

Post-translational modifications for ENSG00000233538 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000233538 Gene

Domains & Families for ENSG00000233538 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000233538 Gene

Function for ENSG00000233538 Gene

Phenotypes From GWAS Catalog for ENSG00000233538 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000233538 Gene

Localization for ENSG00000233538 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000233538 Gene

Pathways & Interactions for ENSG00000233538 Gene

SuperPathways for ENSG00000233538 Gene

No Data Available

Interacting Proteins for ENSG00000233538 Gene

Gene Ontology (GO) - Biological Process for ENSG00000233538 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000233538 Gene

Drugs & Compounds for ENSG00000233538 Gene

No Compound Related Data Available

Transcripts for ENSG00000233538 Gene

mRNA/cDNA for ENSG00000233538 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000233538 Gene

No ASD Table

Relevant External Links for ENSG00000233538 Gene

GeneLoc Exon Structure for
ENSG00000233538

Expression for ENSG00000233538 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000233538 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000233538 Gene

This gene is overexpressed in Testis (x12.1), Whole Blood (x7.8), Brain - Cerebellum (x5.0), and Brain - Cerebellar Hemisphere (x4.7).
genes like me logo Genes that share expression patterns with ENSG00000233538: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000233538 Gene

Orthologs for ENSG00000233538 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ENSG00000233538 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 34
  • 97 (a)
OneToOne
Species where no ortholog for ENSG00000233538 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000233538 Gene

ENSEMBL:
Gene Tree for ENSG00000233538 (if available)
TreeFam:
Gene Tree for ENSG00000233538 (if available)

Paralogs for ENSG00000233538 Gene

No data available for Paralogs for ENSG00000233538 Gene

Variants for ENSG00000233538 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000233538 Gene

Disorders for ENSG00000233538 Gene

No disorders were found for ENSG00000233538 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000233538 Gene

Publications for ENSG00000233538 Gene

No publications were found for ENSG00000233538 Gene.

Products for ENSG00000233538 Gene

Sources for ENSG00000233538 Gene

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