Aliases for ENSG00000233359 Gene

Data sources for ENSG00000233359 Gene:

RNA type for ENSG00000233359 Gene

lncRNA

Aliases for ENSG00000233359 Gene

External Ids for ENSG00000233359 Gene

Previous GeneCards Identifiers for ENSG00000233359 Gene

  • GC01M102665

Summaries for ENSG00000233359 Gene

GeneCards Summary for ENSG00000233359 Gene

ENSG00000233359 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000233359 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000233359 Gene

Genomics for ENSG00000233359 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000233359 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J102832 Enhancer 0.7 Ensembl ENCODE 4.5 -440.7 -440698 3.2 MBD2 CTBP1 CUX1 TCF7L2 ZNF217 FOXA1 CTCF HSALNG0005613 LOC107985096 ENSG00000233359 piR-50447-001 ENSG00000230864 COL11A1 OLFM3
GH01J102852 Enhancer 0.4 ENCODE 4.4 -459.4 -459436 1.5 CTCF ATF2 RAD21 ENSG00000230864 ENSG00000233359 piR-50447-001 HSALNG0005613 LOC107985096 COL11A1 OLFM3
GH01J102858 Enhancer 0.3 Ensembl ENCODE 4.3 -465.2 -465173 0.9 ENSG00000233359 ENSG00000230864 MN308763 COL11A1 OLFM3
GH01J102776 Enhancer 0.3 Ensembl 4.4 -383.0 -382950 0.8 EP300 ENSG00000233359 piR-36588-019 piR-33730-005 ENSG00000230864 COL11A1 OLFM3
GH01J102160 Enhancer 0.2 Ensembl 0.1 +232.1 232149 0.6 HSALNG0005601 lnc-OLFM3-3 piR-39807-003 OLFM3 ENSG00000233359 COL11A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000233359 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000233359 Gene

Latest Assembly
chr1:102,158,671-102,393,650
(GRCh38/hg38)
Size:
234,980 bases
Orientation:
Minus strand

Previous Assembly
chr1:102,665,295-102,855,186
(GRCh37/hg19 by Ensembl)
Size:
189,892 bases
Orientation:
Minus strand

Genomic View for ENSG00000233359 Gene

Genes around ENSG00000233359 on UCSC Golden Path with GeneCards custom track
ENSG00000233359 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000233359 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000233359 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000233359 Gene

Proteins for ENSG00000233359 Gene

Post-translational modifications for ENSG00000233359 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000233359 Gene

Domains & Families for ENSG00000233359 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000233359 Gene

Function for ENSG00000233359 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000233359 Gene

Localization for ENSG00000233359 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000233359 Gene

Pathways & Interactions for ENSG00000233359 Gene

PathCards logo

SuperPathways for ENSG00000233359 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000233359 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000233359 Gene

Drugs & Compounds for ENSG00000233359 Gene

No Compound Related Data Available

Transcripts for ENSG00000233359 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000233359 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00005F886B_9606 lncRNA 657 4

Ensembl: ENST00000447916 (view in UCSC) ,

LncBook: HSALNT0011665,

LNCipedia: lnc-OLFM3-1:1,

NONCODE: NONHSAT004872.2,

URS0000EF7010_9606 lncRNA 1136 1

Ensembl: ENST00000656454 (view in UCSC) ,

URS00008B85D7_9606 lncRNA 433 3

LncBook: HSALNT0011671,

LNCipedia: lnc-OLFM3-1:2,

NONCODE: NONHSAT004874.2,

URS00008B57F6_9606 lncRNA 287 3

LncBook: HSALNT0011670,

LNCipedia: lnc-OLFM3-1:4,

NONCODE: NONHSAT004873.2,

URS00008BC6CF_9606 lncRNA 281 3

LncBook: HSALNT0011672,

LNCipedia: lnc-OLFM3-1:3,

NONCODE: NONHSAT004875.2,

ENSG00000233359 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000233359 Gene

No ASD Table

Relevant External Links for ENSG00000233359 Gene

GeneLoc Exon Structure for
ENSG00000233359

No data available for mRNA/cDNA for ENSG00000233359 Gene

Expression for ENSG00000233359 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000233359 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000233359 Gene

This gene is overexpressed in Testis (x37.9), Brain - Spinal cord (cervical c-1) (x8.5), and Brain - Substantia nigra (x6.5).
genes like me logo Genes that share expression patterns with ENSG00000233359: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000233359 Gene

Orthologs for ENSG00000233359 Gene

Evolution for ENSG00000233359 Gene

ENSEMBL:
Gene Tree for ENSG00000233359 (if available)
TreeFam:
Gene Tree for ENSG00000233359 (if available)

No data available for Orthologs for ENSG00000233359 Gene

Paralogs for ENSG00000233359 Gene

No data available for Paralogs for ENSG00000233359 Gene

Variants for ENSG00000233359 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000233359 Gene

Disorders for ENSG00000233359 Gene

Additional Disease Information for ENSG00000233359

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000233359 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000233359 Gene

Publications for ENSG00000233359 Gene

No publications were found for ENSG00000233359 Gene.

No data available for Mastermind for ENSG00000233359 Gene

Products for ENSG00000233359 Gene

Sources for ENSG00000233359 Gene