Aliases for ENSG00000233332 Gene

Subcategory (RNA class) for ENSG00000233332 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000233332 Gene

  • Novel Transcript 5
  • HSALNG0011582 169
  • NONHSAG004668 94
  • Lnc-TARBP1-4 170
  • AL122008.3 5

External Ids for ENSG00000233332 Gene

Previous GeneCards Identifiers for ENSG00000233332 Gene

  • GC01M234348

Summaries for ENSG00000233332 Gene

GeneCards Summary for ENSG00000233332 Gene

ENSG00000233332 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000233332 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000233332 Gene

Genomics for ENSG00000233332 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000233332 Gene

Promoters and enhancers for ENSG00000233332 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J234215 Promoter/Enhancer 1.3 EPDnew Ensembl ENCODE 750.6 +0.7 666 2 ZNF133 GLIS2 ZIC2 ZSCAN4 PATZ1 ZNF692 SP2 ZNF561 ZBTB20 ZBTB48 ENSG00000233332 SLC35F3 TARBP1 HSALNG0011581
GH01J234185 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +27.8 27845 4.1 RAD21 DACH1 ZBTB33 SP1 MAFK KLF14 RXRA CTCF FOXA2 PATZ1 ENSG00000236244 ENSG00000235605 ENSG00000236358 ENSG00000233332 HSALNG0011581 SLC35F3
GH01J234212 Enhancer 0.5 ENCODE 0.6 +2.2 2178 0.2 CTCF ETV6 RAD21 ELF1 STAT1 ZNF143 ZNF2 ENSG00000233332 HSALNG0011581 SLC35F3
GH01J234206 Enhancer 0.8 Ensembl ENCODE 0.4 +8.0 7987 1 ZNF362 ZNF280D ZSCAN21 IKZF1 JUN ETV6 JUND ZBTB48 ZEB1 ZBTB17 ENSG00000233332 HSALNG0011581 SLC35F3
GH01J234217 Enhancer 0.3 Ensembl 0.6 -2.6 -2613 0.2 HDAC2 ZFX ENSG00000236244 ENSG00000233332 L13713-021 SLC35F3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000233332 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000233332 Gene

Genomic Locations for ENSG00000233332 Gene
chr1:234,212,606-234,215,088
(GRCh38/hg38)
Size:
2,483 bases
Orientation:
Minus strand
chr1:234,348,352-234,350,834
(GRCh37/hg19)
Size:
2,483 bases
Orientation:
Minus strand

Genomic View for ENSG00000233332 Gene

Genes around ENSG00000233332 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000233332 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000233332 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000233332 Gene

Proteins for ENSG00000233332 Gene

Post-translational modifications for ENSG00000233332 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000233332 Gene

Domains & Families for ENSG00000233332 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000233332 Gene

Function for ENSG00000233332 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000233332 Gene

Localization for ENSG00000233332 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000233332 Gene

Pathways & Interactions for ENSG00000233332 Gene

PathCards logo

SuperPathways for ENSG00000233332 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000233332 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000233332 Gene

Drugs & Compounds for ENSG00000233332 Gene

No Compound Related Data Available

Transcripts for ENSG00000233332 Gene

mRNA/cDNA for ENSG00000233332 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(1) LNCipedia transcripts :
(1) LncBook transcripts :
(2) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000233332 Gene

No ASD Table

Relevant External Links for ENSG00000233332 Gene

GeneLoc Exon Structure for
ENSG00000233332

Expression for ENSG00000233332 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000233332 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000233332 Gene

This gene is overexpressed in Pancreas (x17.1), Brain - Cerebellar Hemisphere (x9.4), and Brain - Cerebellum (x8.0).
genes like me logo Genes that share expression patterns with ENSG00000233332: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000233332 Gene

Orthologs for ENSG00000233332 Gene

Evolution for ENSG00000233332 Gene

ENSEMBL:
Gene Tree for ENSG00000233332 (if available)
TreeFam:
Gene Tree for ENSG00000233332 (if available)

No data available for Orthologs for ENSG00000233332 Gene

Paralogs for ENSG00000233332 Gene

No data available for Paralogs for ENSG00000233332 Gene

Variants for ENSG00000233332 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000233332 Gene

Disorders for ENSG00000233332 Gene

No disorders were found for ENSG00000233332 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000233332 Gene

Publications for ENSG00000233332 Gene

No publications were found for ENSG00000233332 Gene.

No data available for External Links for ENSG00000233332 Gene

Products for ENSG00000233332 Gene

Sources for ENSG00000233332 Gene