Aliases for ENSG00000233290 Gene

Subcategory (RNA class) for ENSG00000233290 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000233290 Gene

  • Novel Transcript 5
  • HSALNG0004741 167
  • NONHSAG001923 92
  • NONHSAG001921 92
  • HSALNG0004732 167
  • Lnc-TTLL7-6 168
  • Lnc-TTLL7-5 168
  • AL157944.1 5

External Ids for ENSG00000233290 Gene

Previous GeneCards Identifiers for ENSG00000233290 Gene

  • GC01M082680

Summaries for ENSG00000233290 Gene

GeneCards Summary for ENSG00000233290 Gene

ENSG00000233290 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000233290 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000233290 Gene

Genomics for ENSG00000233290 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000233290 Gene

Promoters and enhancers for ENSG00000233290 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J082848 Promoter/Enhancer 0.8 Ensembl ENCODE 500.7 +0.6 604 1.6 POLR2A TAF1 CHD7 TBP POU5F1 ENSG00000233290 piR-31470-020 lnc-ADGRL2-9
GH01J082849 Enhancer 0.2 Ensembl 500.7 -0.8 -796 0.4 ENSG00000233290 piR-41838-001 lnc-ADGRL2-9
GH01J082225 Enhancer 0.9 Ensembl ENCODE 5.9 +621.7 621704 4.2 ZBTB40 TRIM22 BCL11A FOS NBN SPI1 BATF EBF1 IKZF1 BMI1 ENSG00000233290 piR-38959-002 HSALNG0004730
GH01J082845 Enhancer 1.1 VISTA UCNEbase FANTOM5 Ensembl 0.7 +3.2 3204 2.8 EP300 SMARCA4 RFX5 POLR2A RAD21 ENSG00000233290 piR-31470-020 lnc-ADGRL2-9
GH01J082835 Enhancer 0.4 Ensembl ENCODE 0.4 +10.5 10490 3.8 FOS ENSG00000233290 piR-31470-020 lnc-ADGRL2-9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000233290 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000233290 Gene

Genomic Locations for ENSG00000233290 Gene
chr1:82,212,413-82,848,205
(GRCh38/hg38)
Size:
635,793 bases
Orientation:
Minus strand
chr1:82,680,904-82,726,817
(GRCh37/hg19)
Size:
45,914 bases
Orientation:
Minus strand

Genomic View for ENSG00000233290 Gene

Genes around ENSG00000233290 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000233290 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000233290 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000233290 Gene

Proteins for ENSG00000233290 Gene

Post-translational modifications for ENSG00000233290 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000233290 Gene

Domains & Families for ENSG00000233290 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000233290 Gene

Function for ENSG00000233290 Gene

Phenotypes From GWAS Catalog for ENSG00000233290 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000233290 Gene

Localization for ENSG00000233290 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000233290 Gene

Pathways & Interactions for ENSG00000233290 Gene

PathCards logo

SuperPathways for ENSG00000233290 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000233290 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000233290 Gene

Drugs & Compounds for ENSG00000233290 Gene

No Compound Related Data Available

Transcripts for ENSG00000233290 Gene

mRNA/cDNA for ENSG00000233290 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000233290 Gene

No ASD Table

Relevant External Links for ENSG00000233290 Gene

GeneLoc Exon Structure for
ENSG00000233290

Expression for ENSG00000233290 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000233290 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000233290 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (x4.7).
genes like me logo Genes that share expression patterns with ENSG00000233290: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000233290 Gene

Orthologs for ENSG00000233290 Gene

Evolution for ENSG00000233290 Gene

ENSEMBL:
Gene Tree for ENSG00000233290 (if available)
TreeFam:
Gene Tree for ENSG00000233290 (if available)

No data available for Orthologs for ENSG00000233290 Gene

Paralogs for ENSG00000233290 Gene

No data available for Paralogs for ENSG00000233290 Gene

Variants for ENSG00000233290 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000233290 Gene

Disorders for ENSG00000233290 Gene

No disorders were found for ENSG00000233290 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000233290 Gene

Publications for ENSG00000233290 Gene

No publications were found for ENSG00000233290 Gene.

No data available for Mastermind for ENSG00000233290 Gene

Products for ENSG00000233290 Gene

Sources for ENSG00000233290 Gene