Aliases for ENSG00000233099 Gene

Data sources for ENSG00000233099 Gene:

RNA type for ENSG00000233099 Gene

lncRNA

Aliases for ENSG00000233099 Gene

External Ids for ENSG00000233099 Gene

Previous GeneCards Identifiers for ENSG00000233099 Gene

  • GC01M077811

Summaries for ENSG00000233099 Gene

GeneCards Summary for ENSG00000233099 Gene

ENSG00000233099 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000233099 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000233099 Gene

Genomics for ENSG00000233099 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000233099 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J077412 Enhancer 0.8 ENCODE dbSUPER 250.7 +1.0 1006 0.9 JUND ZIC2 CEBPB MYC MAX POLR2A ATF4 GLIS1 L3MBTL2 BCL6B ENSG00000233099 HSALNG0004570 AK5 PIGK piR-33614-010 ZZZ3
GH01J077414 Enhancer 0.7 FANTOM5 dbSUPER 250.7 +0.1 102 0.2 SPI1 POLR2A PKNOX1 IKZF1 EED RUNX3 ENSG00000233099 HSALNG0004570 AK5 piR-33614-010 ZZZ3
GH01J077413 Enhancer 0.4 ENCODE dbSUPER 250.7 +0.4 408 0.3 PKNOX1 ENSG00000233099 HSALNG0004570 AK5 piR-33614-010 ZZZ3
GH01J077509 Enhancer 1.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.9 -99.0 -99041 8 JUND RAD51 YY1 CTCF BHLHE40 TAF1 MEIS2 SP1 CEBPB POLR2A AK5 ENSG00000233099 RNU7-8P ZZZ3 GIPC2 FUBP1 piR-33422-009 HSALNG0004573
GH01J077321 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 12.6 +91.5 91511 2.3 JUND ZNF316 NFE2 NFE2L2 MAFK MAFG ZEB2 MAFF BHLHE40 ARID1B AK5 ENSG00000233099 RNU7-8P FUBP1 ENSG00000213561 piR-33614-010 HSALNG0004568 ZZZ3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000233099 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000233099 Gene

Latest Assembly
chr1:77,344,703-77,413,760
(GRCh38/hg38)
Size:
69,058 bases
Orientation:
Minus strand

Previous Assembly
chr1:77,811,731-77,815,270
(GRCh37/hg19 by Ensembl)
Size:
3,540 bases
Orientation:
Minus strand

Genomic View for ENSG00000233099 Gene

Genes around ENSG00000233099 on UCSC Golden Path with GeneCards custom track
ENSG00000233099 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000233099 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000233099 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000233099 Gene

Proteins for ENSG00000233099 Gene

Post-translational modifications for ENSG00000233099 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000233099 Gene

Domains & Families for ENSG00000233099 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000233099 Gene

Function for ENSG00000233099 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000233099 Gene

Localization for ENSG00000233099 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000233099 Gene

Pathways & Interactions for ENSG00000233099 Gene

PathCards logo

SuperPathways for ENSG00000233099 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000233099 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000233099 Gene

Drugs & Compounds for ENSG00000233099 Gene

No Compound Related Data Available

Transcripts for ENSG00000233099 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000233099 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000042D8DD_9606 lncRNA 379 3

Ensembl: ENST00000436206 (view in UCSC) ,

LNCipedia: lnc-PIGK-1:1,

NONCODE: NONHSAT004027.2,

URS0001BE8E71_9606 lncRNA 2125 1

LncBook: HSALNT0009188,

URS0001BD1A41_9606 lncRNA 2002 1

LncBook: HSALNT0009187,

ENSG00000233099 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000233099 Gene

No ASD Table

Relevant External Links for ENSG00000233099 Gene

GeneLoc Exon Structure for
ENSG00000233099

No data available for mRNA/cDNA for ENSG00000233099 Gene

Expression for ENSG00000233099 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000233099 Gene

genes like me logo Genes that share expression patterns with ENSG00000233099: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000233099 Gene

Orthologs for ENSG00000233099 Gene

Evolution for ENSG00000233099 Gene

ENSEMBL:
Gene Tree for ENSG00000233099 (if available)
TreeFam:
Gene Tree for ENSG00000233099 (if available)

No data available for Orthologs for ENSG00000233099 Gene

Paralogs for ENSG00000233099 Gene

No data available for Paralogs for ENSG00000233099 Gene

Variants for ENSG00000233099 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000233099 Gene

Disorders for ENSG00000233099 Gene

No disorders were found for ENSG00000233099 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000233099 Gene

Publications for ENSG00000233099 Gene

No publications were found for ENSG00000233099 Gene.

No data available for Mastermind for ENSG00000233099 Gene

Products for ENSG00000233099 Gene

Sources for ENSG00000233099 Gene