Aliases for ENSG00000232909 Gene

Data sources for ENSG00000232909 Gene:

RNA type for ENSG00000232909 Gene

lncRNA

Aliases for ENSG00000232909 Gene

External Ids for ENSG00000232909 Gene

Previous GeneCards Identifiers for ENSG00000232909 Gene

  • GC06M035701
  • GC06M036091
  • GC06M038961
  • GC06M039652
  • GC06M039955
  • GC06M041292
  • GC06M036303
  • GC06M036670
  • GC06M037023
  • GC06M037373
  • GC06M037729
  • GC06M038075
  • GC06M038465
  • GC06M038810
  • GC06M042219
  • GC06M043471

Summaries for ENSG00000232909 Gene

GeneCards Summary for ENSG00000232909 Gene

ENSG00000232909 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000232909 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000232909 Gene

Genomics for ENSG00000232909 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000232909 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J035739 Enhancer 1.1 ENCODE dbSUPER 250.7 -0.8 -762 0.2 ZNF654 MYC ZNF600 KLF9 CEBPA ATF3 NFIC YY1 MXD4 CTCF ENSG00000232909 LOC285847 piR-56580-039 ARMC12 CLPSL2
GH06J035736 Enhancer 0.9 ENCODE dbSUPER 250.7 +0.5 488 0.2 ZNF207 ZNF654 ZNF580 ZNF10 ZBTB10 CTCF REST DEK TRIM22 RAD21 ENSG00000232909 HSALNG0049715 LOC285847 ARMC12 CLPSL2
GH06J035734 Enhancer 0.7 dbSUPER 250.7 +1.4 1393 1.4 ZNF207 ZNF10 KLF9 GABPB1 SKIL CTCF BATF ELF1 RB1 IKZF5 ARMC12 ENSG00000232909 HSALNG0049714 HSALNG0049715 LOC285847 ENSG00000228559 CLPSL2
GH06J035737 Promoter/Enhancer 0.5 EPDnew dbSUPER 250.7 -0.1 -98 0.1 ARMC12 ENSG00000232909 HSALNG0049715 LOC285847 ENSG00000228559 piR-56580-039 CLPSL2
GH06J036592 Promoter/Enhancer 3 UCNEbase EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.4 -860.5 -860472 10.7 BCLAF1 SP1 ZNF207 MYC NCOR1 ZNF600 IKZF1 SSRP1 ZNF580 ZNF592 SRSF3 C6orf89 CMTR1 KCTD20 STK38 BRPF3 CDKN1A RAB44 FKBP5 ETV7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000232909 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000232909 Gene

Latest Assembly
chr6:35,726,761-35,736,947
(GRCh38/hg38)
Size:
10,187 bases
Orientation:
Minus strand

Previous Assembly
chr6:35,701,644-35,704,724
(GRCh37/hg19 by Ensembl)
Size:
3,081 bases
Orientation:
Minus strand

Genomic View for ENSG00000232909 Gene

Genes around ENSG00000232909 on UCSC Golden Path with GeneCards custom track
ENSG00000232909 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000232909 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000232909 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000232909 Gene

Proteins for ENSG00000232909 Gene

Post-translational modifications for ENSG00000232909 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000232909 Gene

Domains & Families for ENSG00000232909 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000232909 Gene

Function for ENSG00000232909 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000232909 Gene

Localization for ENSG00000232909 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000232909 Gene

Pathways & Interactions for ENSG00000232909 Gene

PathCards logo

SuperPathways for ENSG00000232909 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000232909 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000232909 Gene

Drugs & Compounds for ENSG00000232909 Gene

No Compound Related Data Available

Transcripts for ENSG00000232909 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000232909 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00003E1E0E_9606 lncRNA 669 2

Ensembl: ENST00000452048 (view in UCSC) ,

LNCipedia: lnc-FKBP5-1:1,

URS00008B6CE0_9606 lncRNA 480 3

LncBook: HSALNT0105502,

LNCipedia: lnc-FKBP5-1:2,

NONCODE: NONHSAT112191.2,

URS00009B51D3_9606 lncRNA 1732 2

LNCipedia: lnc-FKBP5-1:3,

NONCODE: NONHSAT112190.2,

URS00009AEAC7_9606 lncRNA 669 2

LncBook: HSALNT0105505,

NONCODE: NONHSAT209044.1,

URS0001BF322F_9606 lncRNA 1732 1

LncBook: HSALNT0105501,

ENSG00000232909 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000232909 Gene

No ASD Table

Relevant External Links for ENSG00000232909 Gene

GeneLoc Exon Structure for
ENSG00000232909

No data available for mRNA/cDNA for ENSG00000232909 Gene

Expression for ENSG00000232909 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000232909 Gene

Orthologs for ENSG00000232909 Gene

Evolution for ENSG00000232909 Gene

ENSEMBL:
Gene Tree for ENSG00000232909 (if available)
TreeFam:
Gene Tree for ENSG00000232909 (if available)

No data available for Orthologs for ENSG00000232909 Gene

Paralogs for ENSG00000232909 Gene

No data available for Paralogs for ENSG00000232909 Gene

Variants for ENSG00000232909 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000232909 Gene

Disorders for ENSG00000232909 Gene

Additional Disease Information for ENSG00000232909

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000232909 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000232909 Gene

Publications for ENSG00000232909 Gene

No publications were found for ENSG00000232909 Gene.

No data available for Mastermind for ENSG00000232909 Gene

Products for ENSG00000232909 Gene

Sources for ENSG00000232909 Gene