Aliases for ENSG00000232748 Gene

Subcategory (RNA class) for ENSG00000232748 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for ENSG00000232748 Gene

  • Novel Transcript, Antisense To ZNF668 5
  • AC135050.1 5

External Ids for ENSG00000232748 Gene

Previous GeneCards Identifiers for ENSG00000232748 Gene

  • GC16P031070

Summaries for ENSG00000232748 Gene

GeneCards Summary for ENSG00000232748 Gene

ENSG00000232748 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000232748 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000232748 Gene

Genomics for ENSG00000232748 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000232748 Gene

Promoters and enhancers for ENSG00000232748 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J031055 Enhancer 0.3 ENCODE 500.7 -0.7 -743 0.8 YY1 SP1 ENSG00000232748 HSD3B7 ENSG00000260911
GH16J031051 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -6.0 -5959 6.6 ZNF217 JUND FOS ZNF639 POLR2A RFX1 TOE1 EP300 CTBP1 ZNF341 KAT8 HSD3B7 ENSG00000260911 ZNF785 ZNF646 ZNF668 STX1B SETD1A PRSS36 PRSS8
GH16J031045 Enhancer 0.8 Ensembl 0.4 -11.2 -11159 1.4 ZBTB25 SKI TEAD1 ZKSCAN8 ZSCAN9 KLF9 CREB1 FOXA2 CEBPB KAT7 HSD3B7 KAT8 ZNF668 STX1B ZNF646 PRSS53 ENSG00000255439 VKORC1 SETD1A PRSS36
GH16J031062 Enhancer 0.3 Ensembl 0.4 +5.7 5741 0.4 FIP1L1 piR-39363 ENSG00000232748 ZNF668
GH16J031064 Enhancer 0.2 Ensembl 0.4 +6.2 6241 0.2 piR-39363 ENSG00000232748 ZNF668
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000232748 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000232748 Gene

Genomic Locations for ENSG00000232748 Gene
chr16:31,056,460-31,062,803
(GRCh38/hg38)
Size:
6,344 bases
Orientation:
Plus strand
chr16:31,072,813-31,073,451
(GRCh37/hg19)
Size:
639 bases
Orientation:
Plus strand

Genomic View for ENSG00000232748 Gene

Genes around ENSG00000232748 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000232748 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000232748 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000232748 Gene

Proteins for ENSG00000232748 Gene

Post-translational modifications for ENSG00000232748 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000232748 Gene

Domains & Families for ENSG00000232748 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000232748 Gene

Function for ENSG00000232748 Gene

Phenotypes From GWAS Catalog for ENSG00000232748 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000232748 Gene

Localization for ENSG00000232748 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000232748 Gene

Pathways & Interactions for ENSG00000232748 Gene

PathCards logo

SuperPathways for ENSG00000232748 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000232748 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000232748 Gene

Drugs & Compounds for ENSG00000232748 Gene

No Compound Related Data Available

Transcripts for ENSG00000232748 Gene

mRNA/cDNA for ENSG00000232748 Gene

2 RNACentral transcripts :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000232748 Gene

No ASD Table

Relevant External Links for ENSG00000232748 Gene

GeneLoc Exon Structure for
ENSG00000232748

Expression for ENSG00000232748 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000232748 Gene

mRNA expression in normal human tissues for ENSG00000232748 Gene
genes like me logo Genes that share expression patterns with ENSG00000232748: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000232748 Gene

Orthologs for ENSG00000232748 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ENSG00000232748 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 31
  • 100 (a)
OneToOne
Species where no ortholog for ENSG00000232748 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000232748 Gene

ENSEMBL:
Gene Tree for ENSG00000232748 (if available)
TreeFam:
Gene Tree for ENSG00000232748 (if available)

Paralogs for ENSG00000232748 Gene

No data available for Paralogs for ENSG00000232748 Gene

Variants for ENSG00000232748 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000232748 Gene

Disorders for ENSG00000232748 Gene

No disorders were found for ENSG00000232748 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000232748 Gene

Publications for ENSG00000232748 Gene

No publications were found for ENSG00000232748 Gene.

No data available for Mastermind for ENSG00000232748 Gene

Products for ENSG00000232748 Gene

Sources for ENSG00000232748 Gene