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Aliases for ENSG00000232135 Gene

Subcategory (RNA class) for ENSG00000232135 Gene

lncRNA

Aliases for ENSG00000232135 Gene

  • Cytochrome C Oxidase Subunit VIc (COX6C) Pseudogene 5
  • AL031663.1 5

External Ids for ENSG00000232135 Gene

ORGUL Members for ENSG00000232135 Gene

Previous GeneCards Identifiers for ENSG00000232135 Gene

  • GC20M044165

Summaries for ENSG00000232135 Gene

GeneCards Summary for ENSG00000232135 Gene

ENSG00000232135 is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000232135 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000232135 Gene

Genomics for ENSG00000232135 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000232135 Gene

Promoters and enhancers for ENSG00000232135 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J045538 Enhancer 0.4 ENCODE 600.7 -1.5 -1543 0 ZNF143 FOS ENSG00000232135 HSPD1P21 WFDC6 EPPIN-WFDC6
GH20J045507 Enhancer 1.2 FANTOM5 Ensembl ENCODE 15.7 +29.5 29527 2.2 TRIM24 PPARG IKZF1 IKZF2 EP300 CEBPB SOX6 DPF2 MAX RUNX3 ENSG00000232135 PIGT ZNF335 SPINT3 RPL5P2
GH20J045498 Enhancer 0.6 Ensembl 25.7 +35.3 35313 5.8 CREB1 ATF1 ATF7 ZNF629 SCRT2 ZNF664 ATF2 POLR2A ENSG00000232135 WFDC6 WFDC3 HSPD1P21 EPPIN EPPIN-WFDC6 PABPC1L NEURL2 RPL5P2 SPINT3
GH20J045770 Enhancer 1.3 Ensembl ENCODE dbSUPER 10.3 -236.7 -236677 5.8 CC2D1A ELF3 CTCF MNT AHR TFE3 SP7 SP1 PPARG PRDM1 GC20P045773 WFDC3 WFDC13 SPINT5P HNRNPA1P3 UBE2C SNX21 TNNC2 EPPIN EPPIN-WFDC6
GH20J045583 Enhancer 0.5 Ensembl ENCODE 22.5 -45.7 -45686 3.8 MAFK ENSG00000232135 WFDC3 ENSG00000237464 WFDC10A WFDC9 EPPIN EPPIN-WFDC6 HSPD1P21 WFDC6 RNU6ATAC38P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000232135 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000232135 Gene

Genomic Locations for ENSG00000232135 Gene
chr20:45,536,796-45,537,014
(GRCh38/hg38)
Size:
219 bases
Orientation:
Minus strand
chr20:44,165,435-44,165,653
(GRCh37/hg19)
Size:
219 bases
Orientation:
Minus strand

Genomic View for ENSG00000232135 Gene

Genes around ENSG00000232135 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000232135 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000232135 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000232135 Gene

Proteins for ENSG00000232135 Gene

Post-translational modifications for ENSG00000232135 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000232135 Gene

Domains & Families for ENSG00000232135 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000232135 Gene

Function for ENSG00000232135 Gene

Phenotypes From GWAS Catalog for ENSG00000232135 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000232135 Gene

Localization for ENSG00000232135 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000232135 Gene

Pathways & Interactions for ENSG00000232135 Gene

PathCards logo

SuperPathways for ENSG00000232135 Gene

No Data Available

Interacting Proteins for ENSG00000232135 Gene

Gene Ontology (GO) - Biological Process for ENSG00000232135 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000232135 Gene

Drugs & Compounds for ENSG00000232135 Gene

No Compound Related Data Available

Transcripts for ENSG00000232135 Gene

mRNA/cDNA for ENSG00000232135 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000232135 Gene

No ASD Table

Relevant External Links for ENSG00000232135 Gene

GeneLoc Exon Structure for
ENSG00000232135

Expression for ENSG00000232135 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000232135 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000232135 Gene

This gene is overexpressed in Testis (x48.9).
genes like me logo Genes that share expression patterns with ENSG00000232135: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000232135 Gene

Orthologs for ENSG00000232135 Gene

Evolution for ENSG00000232135 Gene

ENSEMBL:
Gene Tree for ENSG00000232135 (if available)
TreeFam:
Gene Tree for ENSG00000232135 (if available)

No data available for Orthologs for ENSG00000232135 Gene

Paralogs for ENSG00000232135 Gene

No data available for Paralogs for ENSG00000232135 Gene

Variants for ENSG00000232135 Gene

Variation tolerance for ENSG00000232135 Gene

Gene Damage Index Score: 5.63; 72.66% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for ENSG00000232135 Gene

Disorders for ENSG00000232135 Gene

No disorders were found for ENSG00000232135 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000232135 Gene

Publications for ENSG00000232135 Gene

No publications were found for ENSG00000232135 Gene.

No data available for External Links for ENSG00000232135 Gene

Products for ENSG00000232135 Gene

Sources for ENSG00000232135 Gene

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