Aliases for ENSG00000231748 Gene

Subcategory (RNA class) for ENSG00000231748 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000231748 Gene

  • Novel Transcript 5
  • NONHSAG006108 92
  • HSALNG0078571 167
  • Lnc-TACR2-1 168
  • AL596223.2 5

External Ids for ENSG00000231748 Gene

Previous GeneCards Identifiers for ENSG00000231748 Gene

  • GC10M071055

Summaries for ENSG00000231748 Gene

GeneCards Summary for ENSG00000231748 Gene

ENSG00000231748 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000231748 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000231748 Gene

Genomics for ENSG00000231748 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000231748 Gene

Promoters and enhancers for ENSG00000231748 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J069269 Promoter 0.8 EPDnew 500.7 -1.8 -1838 0.1 TRIM24 CEBPG CEBPB FOSL1 ZNF589 ATF4 MEIS2 IRF9 ZNF175 HLF ENSG00000231748 HK1 NONHSAG006109.2
GH10J069315 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 12 -50.6 -50550 7.2 HNRNPK EP300 SIN3A PHF8 JUND PHB2 ZFX ZNF10 ZBTB5 ZIC2 HK1 DDX21 DDX50 TYSND1 CCAR1 HNRNPH3 ENSG00000231748 HKDC1 FAM241B piR-50437-063
GH10J069407 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.5 -141.4 -141397 3.8 CTCF NRF1 MYC SP1 PHF8 ZFX ZNF639 ZNF10 ZIC2 POLR2A lnc-HK1-3 DDX50 TYSND1 CCAR1 TACR2 HK1 HKDC1 ENSG00000231748 TSPAN15 SRGN
GH10J069219 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11 +44.9 44878 7.5 CTCF POLR2G SP1 GTF2E2 TEAD4 EP300 ZIC2 POLR2A ZBTB11 AFF1 HKDC1 SUPV3L1 ENSG00000231748 HK1 LOC101928994
GH10J069327 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 11.1 -66.1 -66146 14.2 ZNF217 CTCF NRF1 BCLAF1 PHB2 TEAD4 ZFX ZIC2 SNRNP70 POLR2A CCAR1 HK1 DDX50 ENSG00000231748 SAR1A STOX1 piR-50437-063 RF00017-685 NONHSAG006109.2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000231748 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000231748 Gene

Genomic Locations for ENSG00000231748 Gene
chr10:69,265,342-69,268,148
(GRCh38/hg38)
Size:
2,807 bases
Orientation:
Minus strand
chr10:71,025,098-71,027,904
(GRCh37/hg19)
Size:
2,807 bases
Orientation:
Minus strand

Genomic View for ENSG00000231748 Gene

Genes around ENSG00000231748 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000231748 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000231748 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000231748 Gene

Proteins for ENSG00000231748 Gene

Post-translational modifications for ENSG00000231748 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000231748 Gene

Domains & Families for ENSG00000231748 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000231748 Gene

Function for ENSG00000231748 Gene

Phenotypes From GWAS Catalog for ENSG00000231748 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000231748 Gene

Localization for ENSG00000231748 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000231748 Gene

Pathways & Interactions for ENSG00000231748 Gene

PathCards logo

SuperPathways for ENSG00000231748 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000231748 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000231748 Gene

Drugs & Compounds for ENSG00000231748 Gene

No Compound Related Data Available

Transcripts for ENSG00000231748 Gene

mRNA/cDNA for ENSG00000231748 Gene

3 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
1 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000231748 Gene

No ASD Table

Relevant External Links for ENSG00000231748 Gene

GeneLoc Exon Structure for
ENSG00000231748

Expression for ENSG00000231748 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000231748 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000231748 Gene

This gene is overexpressed in Small Intestine - Terminal Ileum (x16.0), Kidney - Cortex (x9.3), and Colon - Transverse (x4.0).
genes like me logo Genes that share expression patterns with ENSG00000231748: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000231748 Gene

Orthologs for ENSG00000231748 Gene

Evolution for ENSG00000231748 Gene

ENSEMBL:
Gene Tree for ENSG00000231748 (if available)
TreeFam:
Gene Tree for ENSG00000231748 (if available)

No data available for Orthologs for ENSG00000231748 Gene

Paralogs for ENSG00000231748 Gene

No data available for Paralogs for ENSG00000231748 Gene

Variants for ENSG00000231748 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000231748 Gene

Disorders for ENSG00000231748 Gene

No disorders were found for ENSG00000231748 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000231748 Gene

Publications for ENSG00000231748 Gene

No publications were found for ENSG00000231748 Gene.

No data available for Mastermind for ENSG00000231748 Gene

Products for ENSG00000231748 Gene

Sources for ENSG00000231748 Gene