Aliases for ENSG00000231691 Gene

Subcategory (RNA class) for ENSG00000231691 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000231691 Gene

  • Novel Transcript 5
  • NONHSAG004023 94
  • HSALNG0009866 169
  • Lnc-SOX13-3 170
  • AL592114.3 5

External Ids for ENSG00000231691 Gene

Previous GeneCards Identifiers for ENSG00000231691 Gene

  • GC01P204246

Summaries for ENSG00000231691 Gene

GeneCards Summary for ENSG00000231691 Gene

ENSG00000231691 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000231691 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000231691 Gene

Genomics for ENSG00000231691 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000231691 Gene

Promoters and enhancers for ENSG00000231691 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J204275 Enhancer 0.7 ENCODE CraniofacialAtlas dbSUPER 750.6 -0.5 -535 2 RFX1 ZSCAN4 RCOR1 ENSG00000231691 PLEKHA6 lnc-GOLT1A-3
GH01J204278 Enhancer 0.7 ENCODE dbSUPER 750.6 +1.5 1547 0.2 CREB1 RFX1 RXRA ATF1 BMI1 HNF4A ENSG00000231691 HSALNG0009867 PLEKHA6
GH01J204361 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.8 +86.2 86183 3.9 ZBTB40 CTCF SMARCE1 CC2D1A ETV6 ELF1 L3MBTL2 MAX RAD21 MNT lnc-MDM4-10 ZC3H11A MDM4 PPP1R15B ENSG00000231691 SNRPE GOLT1A ETNK2 ERLNC1 PLEKHA6
GH01J204210 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 10.6 -64.1 -64146 4.1 CTCF FOXA1 RBPJ USF2 NR2F1 ATF1 NR2F6 CC2D1A NFYC L3MBTL2 GOLT1A PLEKHA6 MDM4 PPP1R15B ZC3H11A ETNK2 ENSG00000231691 piR-50852-012
GH01J204376 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 10.7 +102.9 102893 6.8 GATA3 SMARCE1 POLR2A TCF7L2 USF2 NR2F6 ZNF217 L3MBTL2 RAD21 MAX ENSG00000226330 PLEKHA6 lnc-PLEKHA6-1 PPP1R15B ENSG00000231691 ETNK2 ERLNC1 PIK3C2B GOLT1A SOX13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000231691 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000231691 Gene

Genomic Locations for ENSG00000231691 Gene
chr1:204,276,901-204,280,363
(GRCh38/hg38)
Size:
3,463 bases
Orientation:
Plus strand
chr1:204,246,133-204,247,076
(GRCh37/hg19)
Size:
944 bases
Orientation:
Plus strand

Genomic View for ENSG00000231691 Gene

Genes around ENSG00000231691 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000231691 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000231691 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000231691 Gene

Proteins for ENSG00000231691 Gene

Post-translational modifications for ENSG00000231691 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000231691 Gene

Domains & Families for ENSG00000231691 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000231691 Gene

Function for ENSG00000231691 Gene

Phenotypes From GWAS Catalog for ENSG00000231691 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000231691 Gene

Localization for ENSG00000231691 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000231691 Gene

Pathways & Interactions for ENSG00000231691 Gene

PathCards logo

SuperPathways for ENSG00000231691 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000231691 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000231691 Gene

Drugs & Compounds for ENSG00000231691 Gene

No Compound Related Data Available

Transcripts for ENSG00000231691 Gene

mRNA/cDNA for ENSG00000231691 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(5) RNACentral transcripts :
(3) LncBook transcripts :
(4) LNCipedia transcripts :
(2) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000231691 Gene

No ASD Table

Relevant External Links for ENSG00000231691 Gene

GeneLoc Exon Structure for
ENSG00000231691

Expression for ENSG00000231691 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000231691 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000231691 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x13.8), Brain - Substantia nigra (x6.5), and Testis (x4.4).
genes like me logo Genes that share expression patterns with ENSG00000231691: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000231691 Gene

Orthologs for ENSG00000231691 Gene

Evolution for ENSG00000231691 Gene

ENSEMBL:
Gene Tree for ENSG00000231691 (if available)
TreeFam:
Gene Tree for ENSG00000231691 (if available)

No data available for Orthologs for ENSG00000231691 Gene

Paralogs for ENSG00000231691 Gene

No data available for Paralogs for ENSG00000231691 Gene

Variants for ENSG00000231691 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000231691 Gene

Disorders for ENSG00000231691 Gene

No disorders were found for ENSG00000231691 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000231691 Gene

Publications for ENSG00000231691 Gene

No publications were found for ENSG00000231691 Gene.

No data available for External Links for ENSG00000231691 Gene

Products for ENSG00000231691 Gene

Sources for ENSG00000231691 Gene