Aliases for ENSG00000231102 Gene

Subcategory (RNA class) for ENSG00000231102 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000231102 Gene

  • Novel Transcript 5
  • Lnc-PRICKLE4-1 170
  • NONHSAG043777 94
  • HSALNG0050049 169
  • AL035588.1 5

External Ids for ENSG00000231102 Gene

Previous GeneCards Identifiers for ENSG00000231102 Gene

  • GC06P041688

Summaries for ENSG00000231102 Gene

GeneCards Summary for ENSG00000231102 Gene

ENSG00000231102 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000231102 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000231102 Gene

Genomics for ENSG00000231102 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000231102 Gene

Promoters and enhancers for ENSG00000231102 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J041697 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.2 -21.9 -21863 3 ZNF121 SP7 POLR2A ZEB2 PATZ1 FOS JUND IKZF1 ATF2 CEBPG TFEB ENSG00000231102 PGC MDFI MED20 RF00017-5531 lnc-PGC-2 lnc-PGC-1 RF00017-5528
GH06J041692 Enhancer 0.9 FANTOM5 Ensembl dbSUPER 12.2 -25.9 -25895 3.8 GLIS2 REST PKNOX1 BCOR ZFHX2 ZMYM3 ENSG00000231102 TFEB PGC MDFI FRS3 RF00017-5531 lnc-PGC-2 lnc-PGC-1 RF00017-5528
GH06J041776 Enhancer 0.9 ENCODE 11.7 +55.7 55702 0.2 CTCF HCFC1 MIXL1 MYC CC2D1A RAD21 MAX MNT GTF2F1 ELF3 PGC TFEB ENSG00000231102 CCND3 TAF8 BYSL MED20 ENSG00000207371 RNU6-761P piR-30478
GH06J041763 Enhancer 0.6 Ensembl 12.2 +43.2 43235 0.5 ZNF121 NFIB BCOR NFIC PTBP1 ZFHX2 WT1 KDM1A ZMYM3 SMARCA5 ENSG00000269387 piR-41405-047 TAF8 TFEB ENSG00000231102 UBR2 PGC RF00017-5528
GH06J041758 Enhancer 0.5 Ensembl ENCODE 12.2 +38.6 38602 1.2 ZBTB6 SCRT2 TFEB ENSG00000231102 FRS3 MED20 PGC ENSG00000269387 RF00017-5528
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000231102 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000231102 Gene

Genomic Locations for ENSG00000231102 Gene
chr6:41,720,396-41,734,032
(GRCh38/hg38)
Size:
13,637 bases
Orientation:
Plus strand
chr6:41,688,134-41,701,770
(GRCh37/hg19)
Size:
13,637 bases
Orientation:
Plus strand

Genomic View for ENSG00000231102 Gene

Genes around ENSG00000231102 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000231102 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000231102 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000231102 Gene

Proteins for ENSG00000231102 Gene

Post-translational modifications for ENSG00000231102 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000231102 Gene

Domains & Families for ENSG00000231102 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000231102 Gene

Function for ENSG00000231102 Gene

Phenotypes From GWAS Catalog for ENSG00000231102 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000231102 Gene

Localization for ENSG00000231102 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000231102 Gene

Pathways & Interactions for ENSG00000231102 Gene

PathCards logo

SuperPathways for ENSG00000231102 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000231102 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000231102 Gene

Drugs & Compounds for ENSG00000231102 Gene

No Compound Related Data Available

Transcripts for ENSG00000231102 Gene

mRNA/cDNA for ENSG00000231102 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LncBook transcripts :
(1) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000231102 Gene

No ASD Table

Relevant External Links for ENSG00000231102 Gene

GeneLoc Exon Structure for
ENSG00000231102

Expression for ENSG00000231102 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000231102 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000231102 Gene

This gene is overexpressed in Whole Blood (x8.6).
genes like me logo Genes that share expression patterns with ENSG00000231102: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000231102 Gene

Orthologs for ENSG00000231102 Gene

Evolution for ENSG00000231102 Gene

ENSEMBL:
Gene Tree for ENSG00000231102 (if available)
TreeFam:
Gene Tree for ENSG00000231102 (if available)

No data available for Orthologs for ENSG00000231102 Gene

Paralogs for ENSG00000231102 Gene

No data available for Paralogs for ENSG00000231102 Gene

Variants for ENSG00000231102 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000231102 Gene

Disorders for ENSG00000231102 Gene

No disorders were found for ENSG00000231102 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000231102 Gene

Publications for ENSG00000231102 Gene

No publications were found for ENSG00000231102 Gene.

No data available for External Links for ENSG00000231102 Gene

Products for ENSG00000231102 Gene

Sources for ENSG00000231102 Gene