Aliases for ENSG00000231039 Gene

Data sources for ENSG00000231039 Gene:

RNA type for ENSG00000231039 Gene

lncRNA

Aliases for ENSG00000231039 Gene

External Ids for ENSG00000231039 Gene

Previous GeneCards Identifiers for ENSG00000231039 Gene

  • GC10P005276

Summaries for ENSG00000231039 Gene

GeneCards Summary for ENSG00000231039 Gene

ENSG00000231039 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000231039 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000231039 Gene

Genomics for ENSG00000231039 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000231039 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J005234 Enhancer 1 Ensembl ENCODE 250.7 +0.5 547 2.4 SSRP1 CEBPA YY1 CEBPB HOMEZ THAP11 FOXA2 MAFF SMAD4 RXRA ENSG00000231039 piR-59297-034 LINC02561 UCN3 TUBAL3 AKR1C8P lnc-AKR1C4-3 AKR1C4
GH10J005887 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 5.2 +656.3 656304 5.2 SP1 ZNF207 MYC IKZF1 ZNF600 ZNF580 POLR2A CEBPA ZSCAN16 ZIC2 FBH1 ANKRD16 HSALNG0075903 TASOR2 ENSG00000232807 NRBF2P5 ENSG00000226647 IL15RA RBM17 GDI2
GH10J005260 Enhancer 0.3 Ensembl 0.3 +27.1 27147 0.8 RAD21 lnc-TUBAL3-3 AKR1C4 UCN3 piR-37026-037 ENSG00000231039
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000231039 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000231039 Gene

Latest Assembly
chr10:5,234,054-5,264,790
(GRCh38/hg38)
Size:
30,737 bases
Orientation:
Plus strand

Previous Assembly
chr10:5,276,321-5,305,371
(GRCh37/hg19 by Ensembl)
Size:
29,051 bases
Orientation:
Plus strand

Genomic View for ENSG00000231039 Gene

Genes around ENSG00000231039 on UCSC Golden Path with GeneCards custom track
ENSG00000231039 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000231039 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000231039 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000231039 Gene

Proteins for ENSG00000231039 Gene

Post-translational modifications for ENSG00000231039 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000231039 Gene

Domains & Families for ENSG00000231039 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000231039 Gene

Function for ENSG00000231039 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000231039 Gene

Localization for ENSG00000231039 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000231039 Gene

Pathways & Interactions for ENSG00000231039 Gene

PathCards logo

SuperPathways for ENSG00000231039 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000231039 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000231039 Gene

Drugs & Compounds for ENSG00000231039 Gene

No Compound Related Data Available

Transcripts for ENSG00000231039 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000231039 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000565429_9606 lncRNA 682 4

Ensembl: ENST00000428920 (view in UCSC) ,

LncBook: HSALNT0158156,

LNCipedia: lnc-AKR1C4-1:1,

NONCODE: NONHSAT011144.2,

URS00008BD8FF_9606 lncRNA 479 3

LncBook: HSALNT0158155,

LNCipedia: lnc-AKR1C4-1:2,

NONCODE: NONHSAT011145.2,

URS00009C433B_9606 lncRNA 477 2

LncBook: HSALNT0158157,

NONCODE: NONHSAT155009.1,

URS0001BCCB63_9606 lncRNA 2273 1

LncBook: HSALNT0158154,

URS0001BE6D80_9606 lncRNA 680 1

LncBook: HSALNT0158156,

ENSG00000231039 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000231039 Gene

No ASD Table

Relevant External Links for ENSG00000231039 Gene

GeneLoc Exon Structure for
ENSG00000231039

No data available for mRNA/cDNA for ENSG00000231039 Gene

Expression for ENSG00000231039 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000231039 Gene

genes like me logo Genes that share expression patterns with ENSG00000231039: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000231039 Gene

Orthologs for ENSG00000231039 Gene

Evolution for ENSG00000231039 Gene

ENSEMBL:
Gene Tree for ENSG00000231039 (if available)
TreeFam:
Gene Tree for ENSG00000231039 (if available)

No data available for Orthologs for ENSG00000231039 Gene

Paralogs for ENSG00000231039 Gene

No data available for Paralogs for ENSG00000231039 Gene

Variants for ENSG00000231039 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000231039 Gene

Disorders for ENSG00000231039 Gene

Additional Disease Information for ENSG00000231039

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000231039 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000231039 Gene

Publications for ENSG00000231039 Gene

No publications were found for ENSG00000231039 Gene.

No data available for Mastermind for ENSG00000231039 Gene

Products for ENSG00000231039 Gene

Sources for ENSG00000231039 Gene