Aliases for ENSG00000230955 Gene

Subcategory (RNA class) for ENSG00000230955 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000230955 Gene

  • Novel Transcript 5
  • Lnc-C1orf122-1 168
  • NONHSAG001081 92
  • HSALNG0002661 167
  • AL929472.2 5

External Ids for ENSG00000230955 Gene

Previous GeneCards Identifiers for ENSG00000230955 Gene

  • GC01P038326

Summaries for ENSG00000230955 Gene

GeneCards Summary for ENSG00000230955 Gene

ENSG00000230955 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000230955 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000230955 Gene

Genomics for ENSG00000230955 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000230955 Gene

Promoters and enhancers for ENSG00000230955 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J037858 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -0.9 -918 3.6 ZBTB40 ZNF217 EP300 CTCF SIN3A NRF1 POLR2G USF1 SP1 PHF8 ENSG00000230955 MTF1 SF3A3 SNIP1 INPP5B GNL2 UTP11 C1orf109 FHL3
GH01J037861 Enhancer 1 ENCODE dbSUPER 500.7 +1.8 1814 1.4 ZNF639 FOXA1 CTBP1 TEAD1 FOXA2 ZNF316 MAFF CEBPG FOS SAP130 ENSG00000230955 INPP5B lnc-MTF1-2
GH01J038008 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 10.2 +152.2 152213 9.3 ZBTB40 ZNF217 EP300 CTCF ZSCAN5C SIN3A NRF1 MYC TCF12 POLR2G UTP11 INPP5B C1orf109 RNU6-510P SF3A3 ENSG00000230955 MTF1 C1orf122 YRDC CDCA8
GH01J037921 Enhancer 1 ENCODE 11 +61.9 61860 2.7 NRF1 PHB2 EP300 ZBTB11 AFF1 RELA HES1 TOE1 MYC RCOR1 INPP5B RNU6-510P SF3A3 ENSG00000230955 MTF1 UTP11 LOC105378651 HSALNG0002670
GH01J037900 Enhancer 0.9 Ensembl ENCODE 11 +40.9 40903 2.8 SP1 EP300 RELA RCOR1 BCL11A TCF12 ZNF592 SRF ARNT MEF2B INPP5B FHL3 MTF1 ENSG00000230955 UTP11 piR-56759-020 HSALNG0002670
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000230955 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000230955 Gene

Genomic Locations for ENSG00000230955 Gene
chr1:37,860,697-37,861,580
(GRCh38/hg38)
Size:
884 bases
Orientation:
Plus strand
chr1:38,326,369-38,327,252
(GRCh37/hg19)
Size:
884 bases
Orientation:
Plus strand

Genomic View for ENSG00000230955 Gene

Genes around ENSG00000230955 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000230955 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000230955 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000230955 Gene

Proteins for ENSG00000230955 Gene

Post-translational modifications for ENSG00000230955 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000230955 Gene

Domains & Families for ENSG00000230955 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000230955 Gene

Function for ENSG00000230955 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000230955 Gene

Localization for ENSG00000230955 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000230955 Gene

Pathways & Interactions for ENSG00000230955 Gene

PathCards logo

SuperPathways for ENSG00000230955 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000230955 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000230955 Gene

Drugs & Compounds for ENSG00000230955 Gene

No Compound Related Data Available

Transcripts for ENSG00000230955 Gene

mRNA/cDNA for ENSG00000230955 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000230955 Gene

No ASD Table

Relevant External Links for ENSG00000230955 Gene

GeneLoc Exon Structure for
ENSG00000230955

Expression for ENSG00000230955 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000230955 Gene

genes like me logo Genes that share expression patterns with ENSG00000230955: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000230955 Gene

Orthologs for ENSG00000230955 Gene

Evolution for ENSG00000230955 Gene

ENSEMBL:
Gene Tree for ENSG00000230955 (if available)
TreeFam:
Gene Tree for ENSG00000230955 (if available)

No data available for Orthologs for ENSG00000230955 Gene

Paralogs for ENSG00000230955 Gene

No data available for Paralogs for ENSG00000230955 Gene

Variants for ENSG00000230955 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000230955 Gene

Disorders for ENSG00000230955 Gene

No disorders were found for ENSG00000230955 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000230955 Gene

Publications for ENSG00000230955 Gene

No publications were found for ENSG00000230955 Gene.

No data available for Mastermind for ENSG00000230955 Gene

Products for ENSG00000230955 Gene

Sources for ENSG00000230955 Gene