Aliases for ENSG00000230881 Gene

Subcategory (RNA class) for ENSG00000230881 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000230881 Gene

  • Novel Transcript 5
  • NONHSAG001197 92
  • HSALNG0002958 167
  • Lnc-FOXO6-3 168
  • AL445933.2 5

External Ids for ENSG00000230881 Gene

Previous GeneCards Identifiers for ENSG00000230881 Gene

  • GC01P042001

Summaries for ENSG00000230881 Gene

GeneCards Summary for ENSG00000230881 Gene

ENSG00000230881 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000230881 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000230881 Gene

Genomics for ENSG00000230881 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000230881 Gene

Promoters and enhancers for ENSG00000230881 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J041537 Enhancer 0.9 Ensembl ENCODE 500.7 +1.9 1858 3.4 ZNF639 TRIM28 OSR2 WT1 NFIC ZBTB17 ZFHX2 ZNF843 HIC1 EGR1 ENSG00000230881 ENSG00000230638 LOC100418723 HIVEP3
GH01J041535 Enhancer 0.2 Ensembl 500.7 -0.1 -142 0.2 ENSG00000230881 lnc-EDN2-5 HIVEP3
GH01J041492 Enhancer 1.6 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 11.9 -36.7 -36721 12.3 CTCF MYC NRF1 USF1 RBAK FOS TEAD4 ZFX ZNF10 ZIC2 EXO5 EDN2 ENSG00000230881 ENSG00000230638 RIMS3 FOXO6-AS1 FOXJ3 lnc-EDN2-3
GH01J041798 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.3 +271.4 271357 16 CTCF TCF12 SIN3A FOS TEAD4 ZIC2 REST AFF1 RELA MEF2C HIVEP3 HNRNPFP1 ENSG00000230638 ENSG00000230881 P3H1 HSALNG0002972 HSALNG0002973
GH01J041894 Enhancer 1.4 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 9.8 +363.4 363424 9.6 JUND FOS REST TRIM28 CTBP1 EP300 HINFP RBM25 NR2F2 NCOR1 GUCA2B ENSG00000230638 ENSG00000230881 HIVEP3 piR-59564 piR-47592-001 lnc-HIVEP3-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000230881 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000230881 Gene

Genomic Locations for ENSG00000230881 Gene
chr1:41,535,443-41,535,868
(GRCh38/hg38)
Size:
426 bases
Orientation:
Plus strand
chr1:42,001,114-42,001,539
(GRCh37/hg19)
Size:
426 bases
Orientation:
Plus strand

Genomic View for ENSG00000230881 Gene

Genes around ENSG00000230881 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000230881 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000230881 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000230881 Gene

Proteins for ENSG00000230881 Gene

Post-translational modifications for ENSG00000230881 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000230881 Gene

Domains & Families for ENSG00000230881 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000230881 Gene

Function for ENSG00000230881 Gene

Phenotypes From GWAS Catalog for ENSG00000230881 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000230881 Gene

Localization for ENSG00000230881 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000230881 Gene

Pathways & Interactions for ENSG00000230881 Gene

PathCards logo

SuperPathways for ENSG00000230881 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000230881 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000230881 Gene

Drugs & Compounds for ENSG00000230881 Gene

No Compound Related Data Available

Transcripts for ENSG00000230881 Gene

mRNA/cDNA for ENSG00000230881 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000230881 Gene

No ASD Table

Relevant External Links for ENSG00000230881 Gene

GeneLoc Exon Structure for
ENSG00000230881

Expression for ENSG00000230881 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000230881 Gene

genes like me logo Genes that share expression patterns with ENSG00000230881: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000230881 Gene

Orthologs for ENSG00000230881 Gene

Evolution for ENSG00000230881 Gene

ENSEMBL:
Gene Tree for ENSG00000230881 (if available)
TreeFam:
Gene Tree for ENSG00000230881 (if available)

No data available for Orthologs for ENSG00000230881 Gene

Paralogs for ENSG00000230881 Gene

No data available for Paralogs for ENSG00000230881 Gene

Variants for ENSG00000230881 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000230881 Gene

Disorders for ENSG00000230881 Gene

No disorders were found for ENSG00000230881 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000230881 Gene

Publications for ENSG00000230881 Gene

No publications were found for ENSG00000230881 Gene.

No data available for Mastermind for ENSG00000230881 Gene

Products for ENSG00000230881 Gene

Sources for ENSG00000230881 Gene