Aliases for ENSG00000230864 Gene

Subcategory (RNA class) for ENSG00000230864 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000230864 Gene

  • Novel Transcript 5
  • NONHSAG002255 92
  • HSALNG0005612 167
  • Lnc-COL11A1-1 168
  • AC099567.1 5

External Ids for ENSG00000230864 Gene

Previous GeneCards Identifiers for ENSG00000230864 Gene

  • GC01M103228

Summaries for ENSG00000230864 Gene

GeneCards Summary for ENSG00000230864 Gene

ENSG00000230864 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000230864 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000230864 Gene

Genomics for ENSG00000230864 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000230864 Gene

Promoters and enhancers for ENSG00000230864 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J102852 Enhancer 0.6 Ensembl ENCODE 500.7 +0.8 813 1.7 CTCF RAD21 ATF2 ENSG00000230864 ENSG00000233359 piR-50447-001
GH01J102836 Enhancer 0.7 Ensembl ENCODE 0.4 +15.9 15864 3 ZNF217 RFX1 CUX1 GATAD2B CTBP1 FOXA1 DPF2 GATA3 SMARCE1 FOS piR-50447-001 ENSG00000230864 piR-36588-019
GH01J102832 Enhancer 0.7 Ensembl ENCODE 0.4 +19.5 19494 3.2 CUX1 CTBP1 MBD2 FOXA1 CTCF GATA3 E2F1 TCF7L2 ZNF217 ENSG00000233359 piR-50447-001 ENSG00000230864 piR-36588-019
GH01J102879 Enhancer 0.7 Ensembl ENCODE 0.3 -26.1 -26098 1.9 EP300 JUND FOS CREB1 FOSL2 JUN MAFK NFE2L2 POLR2A SP1 COL11A1 ENSG00000230864 piR-61514-014
GH01J102858 Enhancer 0.3 Ensembl ENCODE 0.7 -5.0 -4981 0.9 ENSG00000233359 ENSG00000230864 piR-61514-014
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000230864 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000230864 Gene

Genomic Locations for ENSG00000230864 Gene
chr1:102,763,322-102,853,842
(GRCh38/hg38)
Size:
90,521 bases
Orientation:
Minus strand
chr1:103,228,878-103,319,398
(GRCh37/hg19)
Size:
90,521 bases
Orientation:
Minus strand

Genomic View for ENSG00000230864 Gene

Genes around ENSG00000230864 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000230864 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000230864 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000230864 Gene

Proteins for ENSG00000230864 Gene

Post-translational modifications for ENSG00000230864 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000230864 Gene

Domains & Families for ENSG00000230864 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000230864 Gene

Function for ENSG00000230864 Gene

Phenotypes From GWAS Catalog for ENSG00000230864 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000230864 Gene

Localization for ENSG00000230864 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000230864 Gene

Pathways & Interactions for ENSG00000230864 Gene

PathCards logo

SuperPathways for ENSG00000230864 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000230864 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000230864 Gene

Drugs & Compounds for ENSG00000230864 Gene

No Compound Related Data Available

Transcripts for ENSG00000230864 Gene

mRNA/cDNA for ENSG00000230864 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000230864 Gene

No ASD Table

Relevant External Links for ENSG00000230864 Gene

GeneLoc Exon Structure for
ENSG00000230864

Expression for ENSG00000230864 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000230864 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000230864 Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with ENSG00000230864: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000230864 Gene

Orthologs for ENSG00000230864 Gene

Evolution for ENSG00000230864 Gene

ENSEMBL:
Gene Tree for ENSG00000230864 (if available)
TreeFam:
Gene Tree for ENSG00000230864 (if available)

No data available for Orthologs for ENSG00000230864 Gene

Paralogs for ENSG00000230864 Gene

No data available for Paralogs for ENSG00000230864 Gene

Variants for ENSG00000230864 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000230864 Gene

Disorders for ENSG00000230864 Gene

No disorders were found for ENSG00000230864 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000230864 Gene

Publications for ENSG00000230864 Gene

No publications were found for ENSG00000230864 Gene.

No data available for Mastermind for ENSG00000230864 Gene

Products for ENSG00000230864 Gene

Sources for ENSG00000230864 Gene