Aliases for ENSG00000230747 Gene

Data sources for ENSG00000230747 Gene:

Subcategory (RNA class) for ENSG00000230747 Gene

lncRNA

Aliases for ENSG00000230747 Gene

External Ids for ENSG00000230747 Gene

Previous GeneCards Identifiers for ENSG00000230747 Gene

  • GC02M096973

Summaries for ENSG00000230747 Gene

GeneCards Summary for ENSG00000230747 Gene

ENSG00000230747 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000230747 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000230747 Gene

Genomics for ENSG00000230747 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000230747 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J096320 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas 250.7 +0.6 605 2.6 TBP ZBTB10 MXD4 MNT POLR2A BHLHE40 ZIC2 THAP11 ZNF395 NFATC3 ENSG00000230747 SNRNP200 CIAO1 ITPRIPL1
GH02J096323 Promoter 0.5 Ensembl 250.7 -1.2 -1195 0.2 SPI1 WT1 ENSG00000230747 SNRNP200 ITPRIPL1
GH02J096263 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11.5 +56.1 56060 4.1 CHD2 TBP ZBTB10 SIX5 NR2C1 MNT BRCA1 SMAD5 ETS1 ZFP64 CIAO1 HSALNG0017034 TMEM127 piR-32469 SNRNP200 KANSL3 ANKRD36 STARD7-AS1 CNNM3 STARD7
GH02J096255 Promoter/Enhancer 2.1 VISTA FANTOM5 Ensembl ENCODE dbSUPER 10.9 +62.6 62633 7.2 CEBPA FOXA1 DEK IKZF1 HES1 ZNF217 CTCF SIX4 ZEB1 ELF1 CIAO1 SNRNP200 DUSP2 KANSL3 STARD7 STARD7-AS1 ASTL ITPRIPL1 CNNM3 ENSG00000230747
GH02J096535 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 9.7 -216.0 -215962 4.1 TBP SP1 BCL11A SIX5 NR2C1 MNT SMAD5 ETS1 MBD2 ZNF217 ARID5A HSALNG0017054 ITPRIPL1 CNNM4 ENSG00000230747 CIAO1 GPAT2 HSALNG0017060 FER1L5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000230747 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000230747 Gene

Latest Assembly
chr2:96,307,262-96,321,906
(GRCh38/hg38)
Size:
14,645 bases
Orientation:
Minus strand

Previous Assembly
chr2:96,973,001-96,987,469
(GRCh37/hg19 by Ensembl)
Size:
14,469 bases
Orientation:
Minus strand

Genomic View for ENSG00000230747 Gene

Genes around ENSG00000230747 on UCSC Golden Path with GeneCards custom track
ENSG00000230747 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000230747 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000230747 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000230747 Gene

Proteins for ENSG00000230747 Gene

Post-translational modifications for ENSG00000230747 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000230747 Gene

Domains & Families for ENSG00000230747 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000230747 Gene

Function for ENSG00000230747 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000230747 Gene

Localization for ENSG00000230747 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000230747 Gene

Pathways & Interactions for ENSG00000230747 Gene

PathCards logo

SuperPathways for ENSG00000230747 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000230747 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000230747 Gene

Drugs & Compounds for ENSG00000230747 Gene

No Compound Related Data Available

Transcripts for ENSG00000230747 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000230747 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002226F5_9606 lncRNA 740 3

Ensembl: ENST00000421534 (view in UCSC) ,

LNCipedia: lnc-SNRNP200-1:1,

NONCODE: NONHSAT072563.2,

URS00008B3179_9606 lncRNA 1460 2

LNCipedia: lnc-SNRNP200-1:2,

NONCODE: NONHSAT072565.2,

URS0000D5D275_9606 lncRNA 897 2

LncBook: HSALNT0035944,

LNCipedia: lnc-SNRNP200-1:3,

URS00009BB276_9606 lncRNA 740 2

LncBook: HSALNT0035945,

NONCODE: NONHSAT185138.1,

URS0001BF7F75_9606 lncRNA 1459 1

LncBook: HSALNT0035946,

ENSG00000230747 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000230747 Gene

No ASD Table

Relevant External Links for ENSG00000230747 Gene

GeneLoc Exon Structure for
ENSG00000230747

No data available for mRNA/cDNA for ENSG00000230747 Gene

Expression for ENSG00000230747 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000230747 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000230747 Gene

This gene is overexpressed in Testis (x5.2).
genes like me logo Genes that share expression patterns with ENSG00000230747: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000230747 Gene

Orthologs for ENSG00000230747 Gene

Evolution for ENSG00000230747 Gene

ENSEMBL:
Gene Tree for ENSG00000230747 (if available)
TreeFam:
Gene Tree for ENSG00000230747 (if available)

No data available for Orthologs for ENSG00000230747 Gene

Paralogs for ENSG00000230747 Gene

No data available for Paralogs for ENSG00000230747 Gene

Variants for ENSG00000230747 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000230747 Gene

Disorders for ENSG00000230747 Gene

No disorders were found for ENSG00000230747 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000230747 Gene

Publications for ENSG00000230747 Gene

No publications were found for ENSG00000230747 Gene.

No data available for Mastermind for ENSG00000230747 Gene

Products for ENSG00000230747 Gene

Sources for ENSG00000230747 Gene