Aliases for ENSG00000230647 Gene

Subcategory (RNA class) for ENSG00000230647 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000230647 Gene

  • Novel Transcript 5
  • Lnc-HS3ST3B1-1 168
  • NONHSAG020888 92
  • HSALNG0114723 167
  • AC022816.1 5

External Ids for ENSG00000230647 Gene

Previous GeneCards Identifiers for ENSG00000230647 Gene

  • GC17P014277

Summaries for ENSG00000230647 Gene

GeneCards Summary for ENSG00000230647 Gene

ENSG00000230647 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000230647 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000230647 Gene

Genomics for ENSG00000230647 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000230647 Gene

Promoters and enhancers for ENSG00000230647 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J014372 Enhancer 1.5 FANTOM5 Ensembl ENCODE CraniofacialAtlas 500.7 -0.6 -607 2.9 EP300 FOXK2 POLR2G NCOR1 TEAD4 KDM6A ZBTB11 TCF7 MYC TGIF2 ENSG00000230647 RPS18P12 COX10-AS1 ENSG00000266378
GH17J014355 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 -15.1 -15082 7.3 FOXK2 RELA HDAC2 BCL11A FOXA2 CEBPB YY1 NANOG POLR2A SPI1 HS3ST3B1 ENSG00000230647 ENSG00000266378 lnc-HS3ST3B1-5
GH17J014329 Promoter/Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas 0.3 -42.2 -42193 3.9 EP300 CTBP1 SKI ATF2 RBM25 FOXA2 NCOR1 CEBPB ZFP36 GABPA ENSG00000266378 lnc-HS3ST3B1-5 HS3ST3B1 ENSG00000230647
GH17J014351 Enhancer 0.7 FANTOM5 ENCODE 0.4 -22.4 -22449 0.4 POU2F2 AGO2 SPI1 RUNX3 SKIL HS3ST3B1 ENSG00000266709 ENSG00000230647 ENSG00000266378 lnc-HS3ST3B1-5
GH17J014334 Enhancer 0.9 FANTOM5 ENCODE 0.3 -38.5 -38493 3 NR2F2 NCOR1 CREB1 CEBPG RBM22 HDAC2 BHLHE40 ZNF530 MITF ATF4 ENSG00000266378 lnc-HS3ST3B1-5 HS3ST3B1 ENSG00000230647
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000230647 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000230647 Gene

Genomic Locations for ENSG00000230647 Gene
chr17:14,374,139-14,421,472
(GRCh38/hg38)
Size:
47,334 bases
Orientation:
Plus strand
chr17:14,277,456-14,324,343
(GRCh37/hg19)
Size:
46,888 bases
Orientation:
Plus strand

Genomic View for ENSG00000230647 Gene

Genes around ENSG00000230647 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000230647 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000230647 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000230647 Gene

Proteins for ENSG00000230647 Gene

Post-translational modifications for ENSG00000230647 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000230647 Gene

Domains & Families for ENSG00000230647 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000230647 Gene

Function for ENSG00000230647 Gene

Phenotypes From GWAS Catalog for ENSG00000230647 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000230647 Gene

Localization for ENSG00000230647 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000230647 Gene

Pathways & Interactions for ENSG00000230647 Gene

PathCards logo

SuperPathways for ENSG00000230647 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000230647 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000230647 Gene

Drugs & Compounds for ENSG00000230647 Gene

No Compound Related Data Available

Transcripts for ENSG00000230647 Gene

mRNA/cDNA for ENSG00000230647 Gene

6 RNACentral transcripts :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LncBook transcripts :
5 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000230647 Gene

No ASD Table

Relevant External Links for ENSG00000230647 Gene

GeneLoc Exon Structure for
ENSG00000230647

Expression for ENSG00000230647 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000230647 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000230647 Gene

This gene is overexpressed in Liver (x50.3).
genes like me logo Genes that share expression patterns with ENSG00000230647: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000230647 Gene

Orthologs for ENSG00000230647 Gene

Evolution for ENSG00000230647 Gene

ENSEMBL:
Gene Tree for ENSG00000230647 (if available)
TreeFam:
Gene Tree for ENSG00000230647 (if available)

No data available for Orthologs for ENSG00000230647 Gene

Paralogs for ENSG00000230647 Gene

No data available for Paralogs for ENSG00000230647 Gene

Variants for ENSG00000230647 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000230647 Gene

Disorders for ENSG00000230647 Gene

No disorders were found for ENSG00000230647 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000230647 Gene

Publications for ENSG00000230647 Gene

No publications were found for ENSG00000230647 Gene.

No data available for Mastermind for ENSG00000230647 Gene

Products for ENSG00000230647 Gene

Sources for ENSG00000230647 Gene