Aliases for ENSG00000230537 Gene

Subcategory (RNA class) for ENSG00000230537 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000230537 Gene

  • Novel Transcript 5
  • NONHSAG052816.2 91
  • HSALNG0072698 164
  • AL158071.3 5

External Ids for ENSG00000230537 Gene

Previous GeneCards Identifiers for ENSG00000230537 Gene

  • GC09M093867

Summaries for ENSG00000230537 Gene

GeneCards Summary for ENSG00000230537 Gene

ENSG00000230537 is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for ENSG00000230537 Gene

Additional gene information for ENSG00000230537 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000230537 Gene

Genomics for ENSG00000230537 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000230537 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J091211 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 607.5 +1.1 1085 3.1 RBFOX2 SP1 KMT2B FOXA2 ATF3 YY1 ZBTB17 ZBTB33 JUND POLR2A ENSG00000230537 ENSG00000273381 LINC00484 AUH SYK
GH09J091214 Enhancer 0.2 Ensembl 600.7 -1.4 -1355 0.4 ENSG00000230537 lnc-NFIL3-4 AUH SYK
GH09J091160 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas dbSUPER 12 +49.0 49011 6.5 CREB1 LEF1 IKZF1 ZNF692 JUND PHF21A PKNOX1 REST ZNF24 DPF2 ENSG00000237422 LOC100507103 LINC00484 ENSG00000230537 AUH ENSG00000229694 SYK
GH09J091191 Promoter/Enhancer 2.1 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 6.3 +17.5 17462 9.1 RNF2 HNRNPL GATAD2A ATF7 TEAD4 ZNF629 PRDM10 REST TFE3 ZNF512 lnc-AUH-7 piR-38605-013 NFIL3 LINC00484 ENSG00000233081 LINC00475 MTND4P15 SYK ENSG00000273381 ENSG00000230537
GH09J091155 Enhancer 0.8 FANTOM5 Ensembl ENCODE dbSUPER 12.8 +56.6 56575 2 KLF4 ENSG00000230537 LINC00484 ENSG00000229694 ENSG00000237422 LOC100507103 AUH SYK
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000230537 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000230537 Gene

Genomic Locations for ENSG00000230537 Gene
chr9:91,104,327-91,213,046
(GRCh38/hg38)
Size:
108,720 bases
Orientation:
Minus strand

Genomic View for ENSG00000230537 Gene

Genes around ENSG00000230537 on UCSC Golden Path with GeneCards custom track
ENSG00000230537 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000230537 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000230537 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000230537 Gene

Proteins for ENSG00000230537 Gene

Post-translational modifications for ENSG00000230537 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000230537 Gene

Domains & Families for ENSG00000230537 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000230537 Gene

Function for ENSG00000230537 Gene

Phenotypes From GWAS Catalog for ENSG00000230537 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000230537 Gene

Localization for ENSG00000230537 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000230537 Gene

Pathways & Interactions for ENSG00000230537 Gene

PathCards logo

SuperPathways for ENSG00000230537 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000230537 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000230537 Gene

Drugs & Compounds for ENSG00000230537 Gene

No Compound Related Data Available

Transcripts for ENSG00000230537 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000230537 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EED96D_9606 lncRNA 1801 1

Ensembl: ENST00000658132 (view in UCSC) ,

URS0000EF22C3_9606 lncRNA 1479 1

Ensembl: ENST00000423380 (view in UCSC) ,

URS0000EF51C7_9606 lncRNA 1434 1

Ensembl: ENST00000665623 (view in UCSC) ,

URS0000EEFEE3_9606 lncRNA 835 1

Ensembl: ENST00000667274 (view in UCSC) ,

URS00009BA56D_9606 lncRNA 853 2

LncBook: HSALNT0151993,

NONCODE: NONHSAT221005.1,

ENSG00000230537 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000230537 Gene

No ASD Table

Relevant External Links for ENSG00000230537 Gene

GeneLoc Exon Structure for
ENSG00000230537

No data available for mRNA/cDNA for ENSG00000230537 Gene

Expression for ENSG00000230537 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000230537 Gene

Orthologs for ENSG00000230537 Gene

Evolution for ENSG00000230537 Gene

ENSEMBL:
Gene Tree for ENSG00000230537 (if available)
TreeFam:
Gene Tree for ENSG00000230537 (if available)

No data available for Orthologs for ENSG00000230537 Gene

Paralogs for ENSG00000230537 Gene

No data available for Paralogs for ENSG00000230537 Gene

Variants for ENSG00000230537 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000230537 Gene

Disorders for ENSG00000230537 Gene

Additional Disease Information for ENSG00000230537

No disorders were found for ENSG00000230537 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000230537 Gene

Publications for ENSG00000230537 Gene

No publications were found for ENSG00000230537 Gene.

No data available for Mastermind for ENSG00000230537 Gene

Products for ENSG00000230537 Gene

Sources for ENSG00000230537 Gene