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Aliases for ENSG00000230172 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000230172 Gene

  • AC090957.1 5

External Ids for ENSG00000230172 Gene

Previous GeneCards Identifiers for ENSG00000230172 Gene

  • GC03M014806

Summaries for ENSG00000230172 Gene

GeneCards Summary for ENSG00000230172 Gene

ENSG00000230172 is an RNA Gene.

Additional gene information for ENSG00000230172 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000230172 Gene

Genomics for ENSG00000230172 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000230172 Gene

Promoters and enhancers for ENSG00000230172 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J014765 Enhancer 0.5 dbSUPER 650.7 -0.7 -713 4.7 NFIB ZNF16 ZNF24 ZIC2 ENSG00000230172 CAPN7 CCDC174 NR2C2 XPC C3orf20 LINC01267 PIR61652
GH03J014401 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 14.6 +363.2 363194 5.2 HDGF PKNOX1 CLOCK ARNT ZFP64 ARID4B NEUROD1 SIN3A DMAP1 ZNF2 SLC6A6 CCDC174 NR2C2 ENSG00000230172 ENSG00000223398 HDAC11-AS1 MRPS25 XPC SH3BP5-AS1 ENSG00000228242
GH03J015323 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 14.6 -561.3 -561316 11.1 HDGF PKNOX1 CLOCK FOXA2 SIN3A FEZF1 ZBTB7B IRF4 YY1 ZNF143 SH3BP5 CCDC174 SH3BP5-AS1 NR2C2 RBSN ENSG00000230172 CAPN7 HACL1 C3orf20 METTL6
GH03J013878 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE 14.6 +887.8 887823 3.2 KLF17 ZNF2 RAD21 ZEB1 ZNF335 GLIS2 CREM EGR2 SP3 ZNF280D WNT7A HDAC11-AS1 ENSG00000223398 ENSG00000230172 C3orf20 VN1R20P GC03M014606
GH03J014438 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 14.6 +327.0 326991 3.9 PKNOX1 SMAD1 ARNT FEZF1 ZNF2 YY1 ZNF213 FOS ZNF263 REST XPC CCDC174 CAPN7 SH3BP5-AS1 SLC6A6 ENSG00000228242 NR2C2 ENSG00000230172 HDAC11-AS1 ENSG00000223398
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000230172 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000230172 Gene

Genomic Locations for ENSG00000230172 Gene
chr3:14,764,952-14,767,440
(GRCh38/hg38)
Size:
2,489 bases
Orientation:
Minus strand
chr3:14,806,459-14,808,947
(GRCh37/hg19)
Size:
2,489 bases
Orientation:
Minus strand

Genomic View for ENSG00000230172 Gene

Genes around ENSG00000230172 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000230172 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000230172 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000230172 Gene

Proteins for ENSG00000230172 Gene

Post-translational modifications for ENSG00000230172 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000230172 Gene

Domains & Families for ENSG00000230172 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000230172 Gene

Function for ENSG00000230172 Gene

Phenotypes From GWAS Catalog for ENSG00000230172 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000230172 Gene

Localization for ENSG00000230172 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000230172 Gene

Pathways & Interactions for ENSG00000230172 Gene

SuperPathways for ENSG00000230172 Gene

No Data Available

Interacting Proteins for ENSG00000230172 Gene

Gene Ontology (GO) - Biological Process for ENSG00000230172 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000230172 Gene

Drugs & Compounds for ENSG00000230172 Gene

No Compound Related Data Available

Transcripts for ENSG00000230172 Gene

mRNA/cDNA for ENSG00000230172 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000230172 Gene

No ASD Table

Relevant External Links for ENSG00000230172 Gene

GeneLoc Exon Structure for
ENSG00000230172

Expression for ENSG00000230172 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000230172 Gene

genes like me logo Genes that share expression patterns with ENSG00000230172: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000230172 Gene

Orthologs for ENSG00000230172 Gene

Evolution for ENSG00000230172 Gene

ENSEMBL:
Gene Tree for ENSG00000230172 (if available)
TreeFam:
Gene Tree for ENSG00000230172 (if available)

No data available for Orthologs for ENSG00000230172 Gene

Paralogs for ENSG00000230172 Gene

No data available for Paralogs for ENSG00000230172 Gene

Variants for ENSG00000230172 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000230172 Gene

Disorders for ENSG00000230172 Gene

No disorders were found for ENSG00000230172 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000230172 Gene

Publications for ENSG00000230172 Gene

No publications were found for ENSG00000230172 Gene.

Products for ENSG00000230172 Gene

Sources for ENSG00000230172 Gene

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