Aliases for ENSG00000229990 Gene

Subcategory (RNA class) for ENSG00000229990 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000229990 Gene

  • Novel Transcript, Antisense To CAMK2G 5
  • HSALNG0078884 167
  • NONHSAG006234 92
  • Lnc-ZSWIM8-2 168
  • AC022400.2 5

External Ids for ENSG00000229990 Gene

Previous GeneCards Identifiers for ENSG00000229990 Gene

  • GC10P075601

Summaries for ENSG00000229990 Gene

GeneCards Summary for ENSG00000229990 Gene

ENSG00000229990 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000229990 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000229990 Gene

Genomics for ENSG00000229990 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000229990 Gene

Promoters and enhancers for ENSG00000229990 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J073840 Enhancer 1.1 Ensembl dbSUPER 500.7 -1.3 -1332 0.6 EP300 POLR2G NCOR1 KDM6A TCF7 SKI TEAD1 ZKSCAN8 ZSCAN9 FOXA2 ENSG00000229990 lnc-NDST2-5 MYOZ1 ENSG00000224195 NDST2 CAMK2G ZSWIM8 C10orf55
GH10J073842 Enhancer 0.8 Ensembl ENCODE dbSUPER 500.7 +1.8 1754 1.2 SPI1 FOS FOSL2 ZNF664 JUN NFIL3 ENSG00000229990 lnc-NDST2-5 MYOZ1 CAMK2G
GH10J073841 Enhancer 0.7 ENCODE dbSUPER 500.7 +0.3 312 1.1 RAD21 ZNF664 RXRA PRPF4 HNF4A YY1 SP1 ENSG00000229990 lnc-NDST2-5 MYOZ1 FUT11 CAMK2G
GH10J073870 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 12 +30.7 30723 6.7 EP300 ZNF217 CTCF NRF1 POLR2G USF1 PHF8 ZIC2 POLR2A RBM34 CAMK2G MYOZ1 ENSG00000229990 FUT11 ENSG00000272630 lnc-NDST2-5
GH10J073905 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.8 +69.7 69717 12.6 TCF12 JUND TEAD4 FOS ZNF639 ZNF10 ZIC2 POLR2A ZBTB10 ZBTB11 PLAU CAMK2G ENSG00000229990 VCL AGAP5 ENSG00000272791 FUT11 NDST2 SEC24C CFAP70
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000229990 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000229990 Gene

Genomic Locations for ENSG00000229990 Gene
chr10:73,841,833-73,847,115
(GRCh38/hg38)
Size:
5,283 bases
Orientation:
Plus strand
chr10:75,601,591-75,606,324
(GRCh37/hg19)
Size:
4,734 bases
Orientation:
Plus strand

Genomic View for ENSG00000229990 Gene

Genes around ENSG00000229990 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000229990 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000229990 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000229990 Gene

Proteins for ENSG00000229990 Gene

Post-translational modifications for ENSG00000229990 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000229990 Gene

Domains & Families for ENSG00000229990 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000229990 Gene

Function for ENSG00000229990 Gene

Phenotypes From GWAS Catalog for ENSG00000229990 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000229990 Gene

Localization for ENSG00000229990 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000229990 Gene

Pathways & Interactions for ENSG00000229990 Gene

PathCards logo

SuperPathways for ENSG00000229990 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000229990 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000229990 Gene

Drugs & Compounds for ENSG00000229990 Gene

No Compound Related Data Available

Transcripts for ENSG00000229990 Gene

mRNA/cDNA for ENSG00000229990 Gene

3 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
3 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000229990 Gene

No ASD Table

Relevant External Links for ENSG00000229990 Gene

GeneLoc Exon Structure for
ENSG00000229990

Expression for ENSG00000229990 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000229990 Gene

genes like me logo Genes that share expression patterns with ENSG00000229990: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000229990 Gene

Orthologs for ENSG00000229990 Gene

Evolution for ENSG00000229990 Gene

ENSEMBL:
Gene Tree for ENSG00000229990 (if available)
TreeFam:
Gene Tree for ENSG00000229990 (if available)

No data available for Orthologs for ENSG00000229990 Gene

Paralogs for ENSG00000229990 Gene

No data available for Paralogs for ENSG00000229990 Gene

Variants for ENSG00000229990 Gene

Variation tolerance for ENSG00000229990 Gene

Gene Damage Index Score: 2.55; 44.40% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for ENSG00000229990 Gene

Disorders for ENSG00000229990 Gene

No disorders were found for ENSG00000229990 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000229990 Gene

Publications for ENSG00000229990 Gene

No publications were found for ENSG00000229990 Gene.

No data available for Mastermind for ENSG00000229990 Gene

Products for ENSG00000229990 Gene

Sources for ENSG00000229990 Gene