Aliases for ENSG00000229925 Gene

Subcategory (RNA class) for ENSG00000229925 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000229925 Gene

  • Novel Transcript 5
  • NONHSAG032848.2 91
  • HSALNG0133093 164
  • AP001043.1 5
  • Lnc-ETS2-3 165

External Ids for ENSG00000229925 Gene

Previous GeneCards Identifiers for ENSG00000229925 Gene

  • GC21P040260

Summaries for ENSG00000229925 Gene

GeneCards Summary for ENSG00000229925 Gene

ENSG00000229925 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000229925 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000229925 Gene

Genomics for ENSG00000229925 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000229925 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J038888 Enhancer 0.4 ENCODE dbSUPER 600.7 +0.6 608 1.5 CEBPG ENSG00000229925 ENSG00000272015 LOC400867 ENSG00000205622 ETS2 PSMG1
GH21J038897 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +9.7 9728 2.2 CEBPG ATF7 SCRT2 PKNOX1 ATF2 MAX FOXA1 USF2 HNF4A ATF3 lnc-ETS2-5 ENSG00000229925 RF00017-3711 LOC400867 ENSG00000205622 ETS2 PSMG1
GH21J038902 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +15.2 15208 2.8 REST PKNOX1 SP1 HES1 FOXA2 ATF3 YY1 GABPA ZBTB33 ZKSCAN1 HMGN1 lnc-ETS2-5 ENSG00000229925 RF00017-3711 LOC400867 ENSG00000205622 ETS2 PSMG1
GH21J038876 Enhancer 0.7 FANTOM5 Ensembl 0.4 -13.2 -13171 2 RFX1 CEBPB BMI1 SPI1 CEBPG PRDM6 PRDM10 ZSCAN21 ETS2 ERG ENSG00000229925 LOC101928398 ENSG00000205622 PSMG1
GH21J038878 Enhancer 0.7 Ensembl 0.4 -9.6 -9571 2.4 PRDM10 ZNF7 ZIC2 SP1 FOXA2 CEBPB ATF3 YY1 ZBTB33 JUND ENSG00000229925 LOC101928398 LOC400867 ETS2 ENSG00000205622 PSMG1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000229925 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000229925 Gene

Genomic Locations for ENSG00000229925 Gene
chr21:38,888,772-38,903,905
(GRCh38/hg38)
Size:
15,134 bases
Orientation:
Plus strand
chr21:40,260,696-40,275,829
(GRCh37/hg19)
Size:
15,134 bases
Orientation:
Plus strand

Genomic View for ENSG00000229925 Gene

Genes around ENSG00000229925 on UCSC Golden Path with GeneCards custom track
ENSG00000229925 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000229925 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000229925 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000229925 Gene

Proteins for ENSG00000229925 Gene

Post-translational modifications for ENSG00000229925 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000229925 Gene

Domains & Families for ENSG00000229925 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000229925 Gene

Function for ENSG00000229925 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000229925 Gene

Localization for ENSG00000229925 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000229925 Gene

Pathways & Interactions for ENSG00000229925 Gene

PathCards logo

SuperPathways for ENSG00000229925 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000229925 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000229925 Gene

Drugs & Compounds for ENSG00000229925 Gene

No Compound Related Data Available

Transcripts for ENSG00000229925 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000229925 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004C6B3C_9606 lncRNA 288 4

Ensembl: ENST00000434589 (view in UCSC) ,

LncBook: HSALNT0273599,

LNCipedia: lnc-ETS2-3:1,

NONCODE: NONHSAT082131.2,

ENSG00000229925 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000229925 Gene

No ASD Table

Relevant External Links for ENSG00000229925 Gene

GeneLoc Exon Structure for
ENSG00000229925

No data available for mRNA/cDNA for ENSG00000229925 Gene

Expression for ENSG00000229925 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000229925 Gene

genes like me logo Genes that share expression patterns with ENSG00000229925: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000229925 Gene

Orthologs for ENSG00000229925 Gene

Evolution for ENSG00000229925 Gene

ENSEMBL:
Gene Tree for ENSG00000229925 (if available)
TreeFam:
Gene Tree for ENSG00000229925 (if available)

No data available for Orthologs for ENSG00000229925 Gene

Paralogs for ENSG00000229925 Gene

No data available for Paralogs for ENSG00000229925 Gene

Variants for ENSG00000229925 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000229925 Gene

Disorders for ENSG00000229925 Gene

No disorders were found for ENSG00000229925 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000229925 Gene

Publications for ENSG00000229925 Gene

No publications were found for ENSG00000229925 Gene.

No data available for Mastermind for ENSG00000229925 Gene

Products for ENSG00000229925 Gene

Sources for ENSG00000229925 Gene