Aliases for ENSG00000229766 Gene

Subcategory (RNA class) for ENSG00000229766 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000229766 Gene

  • Novel Transcript, Antisense To TMX4 5
  • NONHSAG031237 94
  • HSALNG0128555 169
  • Lnc-PLCB1-1 170
  • AL021396.1 5

External Ids for ENSG00000229766 Gene

Summaries for ENSG00000229766 Gene

GeneCards Summary for ENSG00000229766 Gene

ENSG00000229766 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000229766 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000229766 Gene

Genomics for ENSG00000229766 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000229766 Gene

Promoters and enhancers for ENSG00000229766 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J008018 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 750.6 +0.5 459 3.3 SP1 CTCF MLX RBPJ POLR2A TCF7L2 USF2 HCFC1 ZNF133 MYC TMX4 ENSG00000229766 LOC105372520
GH20J008131 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 10.4 +113.2 113221 4.4 CTCF RBPJ MIXL1 MYC HLF MAX RAD21 MNT ELF3 AHR lnc-TMX4-4 PLCB1 TMX4 ENSG00000229766 piR-46002-336
GH20J008126 Enhancer 1 Ensembl ENCODE 10.5 +108.7 108662 4.5 GATA3 RBPJ TCF7L2 NR2F6 ZNF217 NFYC HLF CEBPG PRDM1 ZNF644 TMX4 ENSG00000229766 lnc-TMX4-4 piR-46002-336 PLCB1
GH20J008043 Enhancer 0.8 Ensembl ENCODE 11.4 +24.7 24721 0.6 CTCF ZNF217 MIXL1 RAD21 PRDM1 REST TRIM22 GATAD2A CTBP1 IRF2 TMX4 ENSG00000229766 PLCB1
GH20J008722 Enhancer 0.8 ENCODE 11.1 +703.3 703319 0.2 CTCF MIXL1 RAD21 ELF3 CEBPG ZSCAN21 PPARG RELA ZNF384 KAT8 ENSG00000229766 TMX4 FJ601684-269 LOC105372521 PLCB1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000229766 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000229766 Gene

Genomic Locations for ENSG00000229766 Gene
chr20:8,019,180-8,043,512
(GRCh38/hg38)
Size:
24,333 bases
Orientation:
Plus strand
chr20:7,999,870-8,024,159
(GRCh37/hg19)
Size:
24,290 bases
Orientation:
Plus strand

Genomic View for ENSG00000229766 Gene

Genes around ENSG00000229766 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000229766 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000229766 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000229766 Gene

Proteins for ENSG00000229766 Gene

Post-translational modifications for ENSG00000229766 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000229766 Gene

Domains & Families for ENSG00000229766 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000229766 Gene

Function for ENSG00000229766 Gene

Phenotypes From GWAS Catalog for ENSG00000229766 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000229766 Gene

Localization for ENSG00000229766 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000229766 Gene

Pathways & Interactions for ENSG00000229766 Gene

PathCards logo

SuperPathways for ENSG00000229766 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000229766 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000229766 Gene

Drugs & Compounds for ENSG00000229766 Gene

No Compound Related Data Available

Transcripts for ENSG00000229766 Gene

mRNA/cDNA for ENSG00000229766 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(11) RNACentral transcripts :
(5) LncBook transcripts :
(10) LNCipedia transcripts :
(6) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000229766 Gene

No ASD Table

Relevant External Links for ENSG00000229766 Gene

GeneLoc Exon Structure for
ENSG00000229766

Expression for ENSG00000229766 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000229766 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000229766 Gene

This gene is overexpressed in Testis (x35.6).
genes like me logo Genes that share expression patterns with ENSG00000229766: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000229766 Gene

Orthologs for ENSG00000229766 Gene

Evolution for ENSG00000229766 Gene

ENSEMBL:
Gene Tree for ENSG00000229766 (if available)
TreeFam:
Gene Tree for ENSG00000229766 (if available)

No data available for Orthologs for ENSG00000229766 Gene

Paralogs for ENSG00000229766 Gene

No data available for Paralogs for ENSG00000229766 Gene

Variants for ENSG00000229766 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000229766 Gene

Disorders for ENSG00000229766 Gene

No disorders were found for ENSG00000229766 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000229766 Gene

Publications for ENSG00000229766 Gene

No publications were found for ENSG00000229766 Gene.

No data available for External Links for ENSG00000229766 Gene

Products for ENSG00000229766 Gene

Sources for ENSG00000229766 Gene