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Aliases for ENSG00000229652 Gene

Subcategory (RNA class) for ENSG00000229652 Gene

lncRNA

Aliases for ENSG00000229652 Gene

  • Small EDRK-Rich Factor 2 (SERF2) Pseudogene 5
  • AL359837.1 5

External Ids for ENSG00000229652 Gene

ORGUL Members for ENSG00000229652 Gene

Previous GeneCards Identifiers for ENSG00000229652 Gene

  • GC01M203322

Summaries for ENSG00000229652 Gene

GeneCards Summary for ENSG00000229652 Gene

ENSG00000229652 is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000229652 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000229652 Gene

Genomics for ENSG00000229652 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000229652 Gene

Promoters and enhancers for ENSG00000229652 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J203353 Enhancer 0.5 Ensembl ENCODE 600.7 -1.0 -950 1.6 FOS ENSG00000229652 LOC100131747 OPTC PRELP LINC01136 BTG2 FMOD LOC102723529
GH01J203319 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 11.3 +29.3 29257 9.8 MTA3 SP1 CC2D1A ZFX ZKSCAN8 CBFA2T2 ZNF148 NKRF MLLT1 ZNF121 ZC3H11A HNRNPA1P59 ZBED6 FMOD SNRPE ENSG00000229652 BTG2 ENSG00000236439 KDM5B TMEM183A
GH01J203285 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 9.9 +64.4 64393 7.1 ZNF652 SP1 CC2D1A ZKSCAN8 CBFA2T2 ZNF148 NKRF MLLT1 POLR2A GTF2F1 BTG2 ZC3H11A ZBED6 SNRPE FMOD PPP1R12B RNU6-487P PRELP ATP2B4 ENSG00000236439
GH01J203272 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 10.3 +79.3 79273 3.6 SP1 ELF3 CC2D1A CTCF CBFA2T2 NKRF MLLT1 ZNF121 GTF2F1 ZNF687 CHIT1 BTG2 LINC01136 RNU6-487P ENSG00000229652 FMOD OPTC PRELP GC01P203263 LINC01353
GH01J203647 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE dbSUPER 9.1 -299.4 -299401 10.6 ZNF652 CC2D1A CBFA2T2 ZNF148 ZNF121 ZNF384 ZNF687 NFIB ZSCAN21 TRIM24 ZC3H11A SNRPE MDM4 ATP2B4 ZBED6 SNORA77 OPTC PPP1R15B ENSG00000229652 FMOD
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000229652 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000229652 Gene

Genomic Locations for ENSG00000229652 Gene
chr1:203,353,365-203,353,651
(GRCh38/hg38)
Size:
287 bases
Orientation:
Minus strand

Genomic View for ENSG00000229652 Gene

Genes around ENSG00000229652 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000229652 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000229652 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000229652 Gene

Proteins for ENSG00000229652 Gene

Post-translational modifications for ENSG00000229652 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000229652 Gene

Domains & Families for ENSG00000229652 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000229652 Gene

Function for ENSG00000229652 Gene

Phenotypes From GWAS Catalog for ENSG00000229652 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000229652 Gene

Localization for ENSG00000229652 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000229652 Gene

Pathways & Interactions for ENSG00000229652 Gene

PathCards logo

SuperPathways for ENSG00000229652 Gene

No Data Available

Interacting Proteins for ENSG00000229652 Gene

Gene Ontology (GO) - Biological Process for ENSG00000229652 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000229652 Gene

Drugs & Compounds for ENSG00000229652 Gene

No Compound Related Data Available

Transcripts for ENSG00000229652 Gene

mRNA/cDNA for ENSG00000229652 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000229652 Gene

No ASD Table

Relevant External Links for ENSG00000229652 Gene

GeneLoc Exon Structure for
ENSG00000229652

Expression for ENSG00000229652 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000229652 Gene

Orthologs for ENSG00000229652 Gene

Evolution for ENSG00000229652 Gene

ENSEMBL:
Gene Tree for ENSG00000229652 (if available)
TreeFam:
Gene Tree for ENSG00000229652 (if available)

No data available for Orthologs for ENSG00000229652 Gene

Paralogs for ENSG00000229652 Gene

No data available for Paralogs for ENSG00000229652 Gene

Variants for ENSG00000229652 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000229652 Gene

Disorders for ENSG00000229652 Gene

No disorders were found for ENSG00000229652 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000229652 Gene

Publications for ENSG00000229652 Gene

No publications were found for ENSG00000229652 Gene.

No data available for External Links for ENSG00000229652 Gene

Products for ENSG00000229652 Gene

Sources for ENSG00000229652 Gene

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