Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ENSG00000229533 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000229533 Gene

  • AC003986.1 5

External Ids for ENSG00000229533 Gene

Summaries for ENSG00000229533 Gene

GeneCards Summary for ENSG00000229533 Gene

ENSG00000229533 is an RNA Gene.

Additional gene information for ENSG00000229533 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000229533 Gene

Genomics for ENSG00000229533 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000229533 Gene

Promoters and enhancers for ENSG00000229533 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J019104 Promoter/Enhancer 2.7 VISTA EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.1 -32.1 -32080 16.4 PKNOX1 ZSCAN4 SIN3A ZNF335 GLIS2 SCRT2 RCOR1 EGR2 SP3 ZBTB11 TWIST1 LOC105375174 FERD3L ENSG00000229533 GC07P019115 ENSG00000236536 GC07M019093
GH07J019403 Enhancer 0.9 Ensembl ENCODE 10.2 +260.8 260828 2.5 JUN GFI1B CEBPB REST EP300 SP1 JUND PRDM6 POLR2A ZBTB48 FERD3L ENSG00000229533 LOC105375179 GC07P019514
GH07J019100 Enhancer 0.6 ENCODE dbSUPER 11.1 -42.2 -42176 3.2 JUND POLR2A CHD2 FERD3L ENSG00000229533 GC07M019093 LOC105375174 TWIST1
GH07J019078 Enhancer 0.5 ENCODE 10.7 -64.7 -64734 2.7 ATF4 JUND ZNF350 CEBPB ATF7 CEBPG TWIST1 ENSG00000236536 ENSG00000229533 FERD3L GC07M019093 GC07P018997
GH07J019664 Enhancer 0.5 ENCODE 10 +520.2 520215 0.8 PKNOX1 GATA3 NBN ATF7 BMI1 ELF1 TWIST1 ENSG00000236536 TWISTNB FERD3L ENSG00000229533 PIR43984 MIR3146 LOC105375180
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000229533 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000229533 Gene

Genomic Locations for ENSG00000229533 Gene
chr7:19,144,293-19,146,253
(GRCh38/hg38)
Size:
1,961 bases
Orientation:
Plus strand
chr7:19,183,916-19,185,876
(GRCh37/hg19)
Size:
1,961 bases
Orientation:
Plus strand

Genomic View for ENSG00000229533 Gene

Genes around ENSG00000229533 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000229533 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000229533 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000229533 Gene

Proteins for ENSG00000229533 Gene

Post-translational modifications for ENSG00000229533 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000229533 Gene

Domains & Families for ENSG00000229533 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000229533 Gene

Function for ENSG00000229533 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000229533 Gene

Localization for ENSG00000229533 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000229533 Gene

Pathways & Interactions for ENSG00000229533 Gene

SuperPathways for ENSG00000229533 Gene

No Data Available

Interacting Proteins for ENSG00000229533 Gene

Gene Ontology (GO) - Biological Process for ENSG00000229533 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000229533 Gene

Drugs & Compounds for ENSG00000229533 Gene

No Compound Related Data Available

Transcripts for ENSG00000229533 Gene

mRNA/cDNA for ENSG00000229533 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000229533 Gene

No ASD Table

Relevant External Links for ENSG00000229533 Gene

GeneLoc Exon Structure for
ENSG00000229533

Expression for ENSG00000229533 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000229533 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000229533 Gene

This gene is overexpressed in Brain - Substantia nigra (x5.4) and Brain - Hypothalamus (x4.9).
genes like me logo Genes that share expression patterns with ENSG00000229533: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000229533 Gene

Orthologs for ENSG00000229533 Gene

Evolution for ENSG00000229533 Gene

ENSEMBL:
Gene Tree for ENSG00000229533 (if available)
TreeFam:
Gene Tree for ENSG00000229533 (if available)

No data available for Orthologs for ENSG00000229533 Gene

Paralogs for ENSG00000229533 Gene

No data available for Paralogs for ENSG00000229533 Gene

Variants for ENSG00000229533 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000229533 Gene

Disorders for ENSG00000229533 Gene

No disorders were found for ENSG00000229533 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000229533 Gene

Publications for ENSG00000229533 Gene

No publications were found for ENSG00000229533 Gene.

Products for ENSG00000229533 Gene

Sources for ENSG00000229533 Gene

Content
Loading form....