Aliases for ENSG00000229498 Gene

Aliases for ENSG00000229498 Gene

  • Novel Transcript 5
  • Lnc-ATOH8-1 170
  • AC105053.1 5

External Ids for ENSG00000229498 Gene

Previous GeneCards Identifiers for ENSG00000229498 Gene

  • GC02P086042

Summaries for ENSG00000229498 Gene

GeneCards Summary for ENSG00000229498 Gene

ENSG00000229498 is an Uncategorized gene.

Additional gene information for ENSG00000229498 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000229498 Gene

Genomics for ENSG00000229498 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000229498 Gene

Promoters and enhancers for ENSG00000229498 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J085814 Enhancer 1.1 Ensembl ENCODE dbSUPER 757.3 -0.8 -813 0.6 CTCF MYC CC2D1A MAX RAD21 ELF3 SP7 RELA ARID2 REST ENSG00000229498 LOC284950 HSALNG0016535
GH02J085815 Enhancer 0.6 Ensembl dbSUPER 750.6 -0.2 -229 0.2 ZIC2 CTCF IKZF5 ENSG00000229498 LOC284950 HSALNG0016535
GH02J085885 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.7 +73.4 73405 5.2 SIN3A SP1 ZBTB40 CTCF SREBF1 SMARCE1 RBPJ POLR2A USF2 NR2F6 ST3GAL5 ST3GAL5-AS1 lnc-POLR1A-7 TCF7L1 USP39 SNORD94 KDM3A ATOH8 C2orf68 ENSG00000246575
GH02J085753 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11.8 -60.0 -59960 4.3 MLX FOXA1 RBPJ TCF7L2 MNT SP1 ZNF384 EZH2 GLIS2 ZIC2 ATOH8 RNU1-38P ENSG00000229498 lnc-ATOH8-3 NONHSAG028402.2
GH02J086032 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.1 +222.5 222514 9.5 SP1 ETV6 RELA RAD21 NKRF POLR2A MLLT1 ZNF687 PRDM1 CREM POLR1A IMMT KDM3A USP39 TCF7L1 ENSG00000228363 ENSG00000229498 ATOH8 RNU1-38P SNORD94
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000229498 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000229498 Gene

Genomic Locations for ENSG00000229498 Gene
chr2:85,815,130-85,825,391
(GRCh38/hg38)
Size:
10,262 bases
Orientation:
Plus strand

Genomic View for ENSG00000229498 Gene

Genes around ENSG00000229498 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000229498 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000229498 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000229498 Gene

Proteins for ENSG00000229498 Gene

Post-translational modifications for ENSG00000229498 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000229498 Gene

Domains & Families for ENSG00000229498 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000229498 Gene

Function for ENSG00000229498 Gene

Phenotypes From GWAS Catalog for ENSG00000229498 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000229498 Gene

Localization for ENSG00000229498 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000229498 Gene

Pathways & Interactions for ENSG00000229498 Gene

PathCards logo

SuperPathways for ENSG00000229498 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000229498 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000229498 Gene

Drugs & Compounds for ENSG00000229498 Gene

No Compound Related Data Available

Transcripts for ENSG00000229498 Gene

mRNA/cDNA for ENSG00000229498 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000229498 Gene

No ASD Table

Relevant External Links for ENSG00000229498 Gene

GeneLoc Exon Structure for
ENSG00000229498

Expression for ENSG00000229498 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000229498 Gene

Orthologs for ENSG00000229498 Gene

Evolution for ENSG00000229498 Gene

ENSEMBL:
Gene Tree for ENSG00000229498 (if available)
TreeFam:
Gene Tree for ENSG00000229498 (if available)

No data available for Orthologs for ENSG00000229498 Gene

Paralogs for ENSG00000229498 Gene

No data available for Paralogs for ENSG00000229498 Gene

Variants for ENSG00000229498 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000229498 Gene

Disorders for ENSG00000229498 Gene

No disorders were found for ENSG00000229498 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000229498 Gene

Publications for ENSG00000229498 Gene

No publications were found for ENSG00000229498 Gene.

No data available for External Links for ENSG00000229498 Gene

Products for ENSG00000229498 Gene

Sources for ENSG00000229498 Gene