Aliases for ENSG00000229382 Gene

Subcategory (RNA class) for ENSG00000229382 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000229382 Gene

  • Novel Transcript 5
  • HSALNG0133620 167
  • NONHSAG033073 92
  • Lnc-COL18A1-3 168
  • BX322557.1 5

External Ids for ENSG00000229382 Gene

Previous GeneCards Identifiers for ENSG00000229382 Gene

  • GC21P046756

Summaries for ENSG00000229382 Gene

GeneCards Summary for ENSG00000229382 Gene

ENSG00000229382 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000229382 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000229382 Gene

Genomics for ENSG00000229382 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000229382 Gene

Promoters and enhancers for ENSG00000229382 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J045336 Enhancer 1.1 Ensembl ENCODE dbSUPER 500.7 +0.2 169 1.7 ZIC2 ZBTB26 ZNF341 ZSCAN9 USF1 CTCF TFDP1 SAP130 GABPB1 ZNF335 ENSG00000229382 LINC00316
GH21J045334 Enhancer 0.2 dbSUPER 500.7 -1.9 -1914 0.4 ENSG00000229382 MTCO1P3 ENSG00000228355 LOC105372838
GH21J045332 Enhancer 1 CraniofacialAtlas dbSUPER 0.7 -3.1 -3121 1.8 TEAD4 ZNF639 ZIC2 FOXA1 TSC22D4 ZNF662 GATAD2B MCM3 ZNF341 ZNF148 ENSG00000228137 MCM3AP UBE2G2 POFUT2 MCM3AP-AS1 COL6A1 ENSG00000227438 COL6A2 LINC01424 CFAP410
GH21J045339 Enhancer 0.3 dbSUPER 0.7 +3.2 3236 0.2 EZH2 COL18A1 COL18A1-AS2 MTCO1P3 ENSG00000228355 ENSG00000229382 LINC00316
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000229382 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000229382 Gene

Genomic Locations for ENSG00000229382 Gene
chr21:45,336,707-45,338,665
(GRCh38/hg38)
Size:
1,959 bases
Orientation:
Plus strand
chr21:46,756,622-46,758,580
(GRCh37/hg19)
Size:
1,959 bases
Orientation:
Plus strand

Genomic View for ENSG00000229382 Gene

Genes around ENSG00000229382 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000229382 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000229382 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000229382 Gene

Proteins for ENSG00000229382 Gene

Post-translational modifications for ENSG00000229382 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000229382 Gene

Domains & Families for ENSG00000229382 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000229382 Gene

Function for ENSG00000229382 Gene

Phenotypes From GWAS Catalog for ENSG00000229382 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000229382 Gene

Localization for ENSG00000229382 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000229382 Gene

Pathways & Interactions for ENSG00000229382 Gene

PathCards logo

SuperPathways for ENSG00000229382 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000229382 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000229382 Gene

Drugs & Compounds for ENSG00000229382 Gene

No Compound Related Data Available

Transcripts for ENSG00000229382 Gene

mRNA/cDNA for ENSG00000229382 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000229382 Gene

No ASD Table

Relevant External Links for ENSG00000229382 Gene

GeneLoc Exon Structure for
ENSG00000229382

Expression for ENSG00000229382 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000229382 Gene

genes like me logo Genes that share expression patterns with ENSG00000229382: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000229382 Gene

Orthologs for ENSG00000229382 Gene

Evolution for ENSG00000229382 Gene

ENSEMBL:
Gene Tree for ENSG00000229382 (if available)
TreeFam:
Gene Tree for ENSG00000229382 (if available)

No data available for Orthologs for ENSG00000229382 Gene

Paralogs for ENSG00000229382 Gene

No data available for Paralogs for ENSG00000229382 Gene

Variants for ENSG00000229382 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000229382 Gene

Disorders for ENSG00000229382 Gene

No disorders were found for ENSG00000229382 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000229382 Gene

Publications for ENSG00000229382 Gene

No publications were found for ENSG00000229382 Gene.

No data available for Mastermind for ENSG00000229382 Gene

Products for ENSG00000229382 Gene

Sources for ENSG00000229382 Gene