Aliases for ENSG00000229294 Gene

Subcategory (RNA class) for ENSG00000229294 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000229294 Gene

  • Novel Transcript 5
  • NONHSAG001729 94
  • AL139294.1 5
  • Lnc-JAK1-3 170

External Ids for ENSG00000229294 Gene

Previous GeneCards Identifiers for ENSG00000229294 Gene

  • GC01M065745

Summaries for ENSG00000229294 Gene

GeneCards Summary for ENSG00000229294 Gene

ENSG00000229294 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000229294 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000229294 Gene

Genomics for ENSG00000229294 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000229294 Gene

Promoters and enhancers for ENSG00000229294 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J065304 Enhancer 0.2 dbSUPER 750.6 +1.6 1602 1.8 ENSG00000229294 LOC102724416 COX6CP13 lnc-JAK1-8 DNAJC6
GH01J065289 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.7 14720 6 SMARCE1 RUNX1 CC2D1A L3MBTL2 DACH1 TEAD4 ZC3H8 ZKSCAN8 ZNF148 GTF2F1 LEPROT DNAJC6 ENSG00000237852 COX6CP13 lnc-JAK1-8 ENSG00000229294 LOC102724416
GH01J065297 Enhancer 0.7 ENCODE dbSUPER 0.4 +8.7 8658 0.1 ZNF217 CTBP1 ESRRA DPF2 GATAD2B CUX1 GATA3 SMARCE1 COX6CP13 lnc-JAK1-8 ENSG00000229294 LOC102724416 DNAJC6
GH01J065284 Enhancer 0.4 Ensembl 0.3 +22.0 22020 0.6 EGR1 KDM1A CBFA2T3 DNAJC6 AK4 COX6CP13 lnc-JAK1-8 ENSG00000229294 LOC102724416
GH01J065298 Enhancer 0.3 dbSUPER 0.4 +6.8 6752 2.2 KDM1A COX6CP13 lnc-JAK1-8 ENSG00000229294 LOC102724416 DNAJC6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000229294 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000229294 Gene

Genomic Locations for ENSG00000229294 Gene
chr1:65,279,456-65,306,521
(GRCh38/hg38)
Size:
27,066 bases
Orientation:
Minus strand
chr1:65,745,139-65,772,204
(GRCh37/hg19)
Size:
27,066 bases
Orientation:
Minus strand

Genomic View for ENSG00000229294 Gene

Genes around ENSG00000229294 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000229294 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000229294 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000229294 Gene

Proteins for ENSG00000229294 Gene

Post-translational modifications for ENSG00000229294 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000229294 Gene

Domains & Families for ENSG00000229294 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000229294 Gene

Function for ENSG00000229294 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000229294 Gene

Localization for ENSG00000229294 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000229294 Gene

Pathways & Interactions for ENSG00000229294 Gene

PathCards logo

SuperPathways for ENSG00000229294 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000229294 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000229294 Gene

Drugs & Compounds for ENSG00000229294 Gene

No Compound Related Data Available

Transcripts for ENSG00000229294 Gene

mRNA/cDNA for ENSG00000229294 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) LNCipedia transcripts :
(2) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000229294 Gene

No ASD Table

Relevant External Links for ENSG00000229294 Gene

GeneLoc Exon Structure for
ENSG00000229294

Expression for ENSG00000229294 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000229294 Gene

mRNA expression in normal human tissues for ENSG00000229294 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000229294 Gene

This gene is overexpressed in Testis (x33.3) and Brain - Cerebellum (x5.3).
genes like me logo Genes that share expression patterns with ENSG00000229294: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000229294 Gene

Orthologs for ENSG00000229294 Gene

Evolution for ENSG00000229294 Gene

ENSEMBL:
Gene Tree for ENSG00000229294 (if available)
TreeFam:
Gene Tree for ENSG00000229294 (if available)

No data available for Orthologs for ENSG00000229294 Gene

Paralogs for ENSG00000229294 Gene

No data available for Paralogs for ENSG00000229294 Gene

Variants for ENSG00000229294 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000229294 Gene

Disorders for ENSG00000229294 Gene

No disorders were found for ENSG00000229294 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000229294 Gene

Publications for ENSG00000229294 Gene

No publications were found for ENSG00000229294 Gene.

No data available for External Links for ENSG00000229294 Gene

Products for ENSG00000229294 Gene

Sources for ENSG00000229294 Gene