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Aliases for ENSG00000229162 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000229162 Gene

  • Novel Transcript 5
  • AL445471.1 5

External Ids for ENSG00000229162 Gene

Previous GeneCards Identifiers for ENSG00000229162 Gene

  • GC01P025287

Summaries for ENSG00000229162 Gene

GeneCards Summary for ENSG00000229162 Gene

ENSG00000229162 is an RNA Gene.

Additional gene information for ENSG00000229162 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000229162 Gene

Genomics for ENSG00000229162 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000229162 Gene

Promoters and enhancers for ENSG00000229162 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J024908 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.9 -41.6 -41556 22.8 SP1 ZNF652 ELF3 CTCF MNT NKRF ZNF121 CEBPG POLR2A ZNF687 RUNX3 MIR6731 ENSG00000229162 RCAN3 ENSG00000231953 RNU6-1208P RSRP1 ENSG00000225643 ENSG00000261349 SRRM1
GH01J025020 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 12.7 +61.3 61348 4.9 SP1 ZNF148 ZNF687 RELA CREM MLLT1 ZBED1 IKZF1 GLIS2 POLR2A MIR4425 RUNX3 ENSG00000229162 RSRP1 SYF2 SRRM1 GC01M024955
GH01J025030 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 12.1 +72.2 72213 6.2 SP1 NKRF ZNF687 IKZF1 RELA CREM MLLT1 MZF1 ZBED1 CREB1 SRRM1 SYF2 MAN1C1 RUNX3 ENSG00000229162 ENSG00000261349 STMN1 RSRP1 SDHDP6 LINC02793
GH01J025028 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 12.1 +67.8 67790 0.9 ZNF687 MLLT1 IKZF1 BACH1 IKZF2 POLR2A LARP7 SMAD5 TRIM22 PKNOX1 RUNX3 ENSG00000229162 MAN1C1 RSRP1 SYF2 MIR4425 LINC02793
GH01J024932 Promoter 1 Ensembl 12.5 -29.0 -29044 0.6 NKRF ZNF687 MLLT1 RAD21 REST LARP7 CTCF ZNF501 TRIM22 EZH2 LOC105376878 ENSG00000229162 RUNX3 GC01M024929 GC01M024930
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000229162 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000229162 Gene

Genomic Locations for ENSG00000229162 Gene
chr1:24,961,345-24,963,097
(GRCh38/hg38)
Size:
1,753 bases
Orientation:
Plus strand
chr1:25,287,836-25,289,588
(GRCh37/hg19)
Size:
1,753 bases
Orientation:
Plus strand

Genomic View for ENSG00000229162 Gene

Genes around ENSG00000229162 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000229162 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000229162 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000229162 Gene

Proteins for ENSG00000229162 Gene

Post-translational modifications for ENSG00000229162 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000229162 Gene

Domains & Families for ENSG00000229162 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000229162 Gene

Function for ENSG00000229162 Gene

Phenotypes From GWAS Catalog for ENSG00000229162 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000229162 Gene

Localization for ENSG00000229162 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000229162 Gene

Pathways & Interactions for ENSG00000229162 Gene

PathCards logo

SuperPathways for ENSG00000229162 Gene

No Data Available

Interacting Proteins for ENSG00000229162 Gene

Gene Ontology (GO) - Biological Process for ENSG00000229162 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000229162 Gene

Drugs & Compounds for ENSG00000229162 Gene

No Compound Related Data Available

Transcripts for ENSG00000229162 Gene

mRNA/cDNA for ENSG00000229162 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000229162 Gene

No ASD Table

Relevant External Links for ENSG00000229162 Gene

GeneLoc Exon Structure for
ENSG00000229162

Expression for ENSG00000229162 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000229162 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000229162 Gene

This gene is overexpressed in Cervix - Endocervix (x8.1), Testis (x5.4), and Whole Blood (x5.0).
genes like me logo Genes that share expression patterns with ENSG00000229162: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000229162 Gene

Orthologs for ENSG00000229162 Gene

Evolution for ENSG00000229162 Gene

ENSEMBL:
Gene Tree for ENSG00000229162 (if available)
TreeFam:
Gene Tree for ENSG00000229162 (if available)

No data available for Orthologs for ENSG00000229162 Gene

Paralogs for ENSG00000229162 Gene

No data available for Paralogs for ENSG00000229162 Gene

Variants for ENSG00000229162 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000229162 Gene

Disorders for ENSG00000229162 Gene

No disorders were found for ENSG00000229162 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000229162 Gene

Publications for ENSG00000229162 Gene

No publications were found for ENSG00000229162 Gene.

No data available for External Links for ENSG00000229162 Gene

Products for ENSG00000229162 Gene

Sources for ENSG00000229162 Gene

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