Aliases for ENSG00000229016 Gene

Aliases for ENSG00000229016 Gene

  • Novel Pseudogene 5
  • AC096638.2 5

External Ids for ENSG00000229016 Gene

Previous GeneCards Identifiers for ENSG00000229016 Gene

  • GC01M218474

Summaries for ENSG00000229016 Gene

GeneCards Summary for ENSG00000229016 Gene

ENSG00000229016 is a Pseudogene.

Additional gene information for ENSG00000229016 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000229016 Gene

Genomics for ENSG00000229016 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000229016 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J218295 Enhancer 1.3 Ensembl ENCODE dbSUPER 600.7 +1.5 1471 12.2 RNF2 CEBPG CTCF PRDM10 ZNF629 ZNF512 LEF1 IKZF1 ZNF692 JUND ENSG00000229016 lnc-GPATCH2-7 RRP15 TGFB2 TGFB2-AS1
GH01J218284 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +16.4 16371 2.8 SP1 CREB1 GATAD2A PRDM10 REST ZNF629 TFE3 SIX5 LEF1 NFKBIZ RRP15 lnc-GPATCH2-11 RIMKLBP2 ENSG00000229016 lnc-GPATCH2-7 TGFB2
GH01J218335 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 -34.6 -34582 1.3 FOXA1 SP1 EGR1 DDX20 PKNOX1 POLR2A SMARCA4 TCF7L2 ZNF217 BCL3 ENSG00000223375 RPS26P17 lnc-RRP15-2 RRP15 TGFB2 lnc-GPATCH2-7 ENSG00000229016
GH01J218317 Enhancer 0.7 Ensembl 0.4 -15.4 -15428 0.4 IKZF1 CBX3 HMBOX1 CTBP1 NFE2 ZNF316 TRIM24 NCOR1 MAFG NFIC TGFB2 TGFB2-AS1 RRP15 ENSG00000229016 lnc-GPATCH2-7 ENSG00000223375 lnc-RRP15-2
GH01J218291 Enhancer 0.3 Ensembl 0.4 +9.8 9771 0.8 SCRT2 RRP15 TGFB2 TGFB2-AS1 ENSG00000229016 lnc-GPATCH2-7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000229016 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000229016 Gene

Genomic Locations for ENSG00000229016 Gene
chr1:218,301,262-218,301,972
(GRCh38/hg38)
Size:
711 bases
Orientation:
Minus strand
chr1:218,474,604-218,475,314
(GRCh37/hg19)
Size:
711 bases
Orientation:
Minus strand

Genomic View for ENSG00000229016 Gene

Genes around ENSG00000229016 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000229016 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000229016 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000229016 Gene

Proteins for ENSG00000229016 Gene

Post-translational modifications for ENSG00000229016 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000229016 Gene

Domains & Families for ENSG00000229016 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000229016 Gene

Function for ENSG00000229016 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000229016 Gene

Localization for ENSG00000229016 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000229016 Gene

Pathways & Interactions for ENSG00000229016 Gene

PathCards logo

SuperPathways for ENSG00000229016 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000229016 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000229016 Gene

Drugs & Compounds for ENSG00000229016 Gene

No Compound Related Data Available

Transcripts for ENSG00000229016 Gene

mRNA/cDNA for ENSG00000229016 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000229016 Gene

No ASD Table

Relevant External Links for ENSG00000229016 Gene

GeneLoc Exon Structure for
ENSG00000229016

Expression for ENSG00000229016 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000229016 Gene

genes like me logo Genes that share expression patterns with ENSG00000229016: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000229016 Gene

Orthologs for ENSG00000229016 Gene

Evolution for ENSG00000229016 Gene

ENSEMBL:
Gene Tree for ENSG00000229016 (if available)
TreeFam:
Gene Tree for ENSG00000229016 (if available)

No data available for Orthologs for ENSG00000229016 Gene

Paralogs for ENSG00000229016 Gene

No data available for Paralogs for ENSG00000229016 Gene

Variants for ENSG00000229016 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000229016 Gene

Disorders for ENSG00000229016 Gene

No disorders were found for ENSG00000229016 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000229016 Gene

Publications for ENSG00000229016 Gene

No publications were found for ENSG00000229016 Gene.

No data available for Mastermind for ENSG00000229016 Gene

Products for ENSG00000229016 Gene

Sources for ENSG00000229016 Gene