Aliases for ENSG00000228988 Gene
Quality Score for this RNA gene is
13
Aliases for ENSG00000228988 Gene
- AL353771.1 5
External Ids for ENSG00000228988 Gene
- Ensembl: ENSG00000228988
Previous GeneCards Identifiers for ENSG00000228988 Gene
- GC01M070684
Summaries for ENSG00000228988 Gene
GeneCards Summary for ENSG00000228988 Gene
ENSG00000228988 is an RNA Gene.
Additional gene information for ENSG00000228988 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228988 Gene
Genomics for ENSG00000228988 Gene
GeneHancer (GH) Regulatory Elements for ENSG00000228988 Gene
Promoters and enhancers for ENSG00000228988 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J070219 | Promoter/Enhancer | 2.3 | EPDnew Ensembl ENCODE dbSUPER | 650.7 | -0.7 | -731 | 4.1 | HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 | SRSF11 ENSG00000228988 LRRC40 GC01P070230 | |
| GH01J070203 | Promoter/Enhancer | 2.3 | EPDnew Ensembl ENCODE dbSUPER | 0.4 | +15.1 | 15143 | 4.3 | HDGF PKNOX1 CLOCK SMAD1 MLX ARNT ARID4B SIN3A DMAP1 YY1 | SRSF11 LRRC40 ZRANB2 ENSG00000228988 | |
| GH01J070226 | Enhancer | 0.6 | FANTOM5 dbSUPER | 0.4 | -5.4 | -5395 | 0.4 | POLR2A | LRRC40 SRSF11 ANKRD13C GC01P070230 ENSG00000228988 | |
| GH01J070227 | Enhancer | 0.4 | dbSUPER | 0.4 | -6.6 | -6620 | 0.7 | ZNF362 PRDM6 ZSCAN5C | LRRC40 SRSF11 GC01P070230 ENSG00000228988 | |
| GH01J070229 | Enhancer | 0.4 | dbSUPER | 0.4 | -9.3 | -9273 | 0.8 | VEZF1 CEBPB | GC01P070230 ENSG00000228988 SRSF11 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around ENSG00000228988 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for ENSG00000228988 Gene
Genomic Locations for ENSG00000228988 Gene
- chr1:70,218,589-70,221,023
- (GRCh38/hg38)
- Size:
- 2,435 bases
- Orientation:
- Minus strand
- chr1:70,684,272-70,686,706
- (GRCh37/hg19)
- Size:
- 2,435 bases
- Orientation:
- Minus strand
Genomic View for ENSG00000228988 Gene
Genes around ENSG00000228988 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p31.1 by Ensembl
ENSG00000228988 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
No data available for RefSeq DNA sequence for ENSG00000228988 Gene
Proteins for ENSG00000228988 Gene
Post-translational modifications for ENSG00000228988 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for ENSG00000228988
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000228988
- Origene Custom Protein Services for ENSG00000228988
- Search GeneTex for Proteins for ENSG00000228988
No data available for DME Specific Peptides for ENSG00000228988 Gene
Domains & Families for ENSG00000228988 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228988 Gene
Function for ENSG00000228988 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for ENSG00000228988
-
miRNA Products
Inhibitory RNA Products
Clone Products
- GenScript: Custom all cDNA clones Services for ENSG00000228988
- VectorBuilder custom plasmid, inducible vectors for ENSG00000228988
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ENSG00000228988
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228988 Gene
Localization for ENSG00000228988 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228988 Gene
Transcripts for ENSG00000228988 Gene
mRNA/cDNA for ENSG00000228988 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000422107 457 bps (uc057hll.1)
- (1) RNA Central transcripts :
CRISPR Products
- Browse CRISPR knockouts for ENSG00000228988
miRNA Products
Inhibitory RNA Products
Clone Products
- GenScript: Custom all cDNA clones Services for ENSG00000228988
- VectorBuilder custom plasmid, inducible vectors for ENSG00000228988
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ENSG00000228988
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Relevant External Links for ENSG00000228988 Gene
- GeneLoc Exon Structure for
- ENSG00000228988
Expression for ENSG00000228988 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228988 Gene
Orthologs for ENSG00000228988 Gene
No data available for Orthologs for ENSG00000228988 Gene
Paralogs for ENSG00000228988 Gene
No data available for Paralogs for ENSG00000228988 Gene
Variants for ENSG00000228988 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228988 Gene
Disorders for ENSG00000228988 Gene
No disorders were found for ENSG00000228988 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228988 Gene
Publications for ENSG00000228988 Gene
No publications were found for ENSG00000228988 Gene.
Products for ENSG00000228988 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000228988
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- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ENSG00000228988
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ENSG00000228988
- GenScript: Custom all cDNA clones Services for ENSG00000228988
- GenScript Custom Purified and Recombinant Proteins Services for ENSG00000228988
- GenScript Custom Assay Services for ENSG00000228988
- GenScript Custom overexpressing Cell Line Services for ENSG00000228988
- Browse GenScript CRISPR for ENSG00000228988
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
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- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for ENSG00000228988
- Browse Sino Biological cDNA Clones
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- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for ENSG00000228988
- VectorBuilder custom plasmid, inducible vectors for ENSG00000228988
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ENSG00000228988
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ENSG00000228988
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ENSG00000228988
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ENSG00000228988
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ENSG00000228988
Sources for ENSG00000228988 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt