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Aliases for ENSG00000228873 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000228873 Gene

  • AC012307.1 5

External Ids for ENSG00000228873 Gene

Previous GeneCards Identifiers for ENSG00000228873 Gene

  • GC02M096811

Summaries for ENSG00000228873 Gene

GeneCards Summary for ENSG00000228873 Gene

ENSG00000228873 is an RNA Gene.

Additional gene information for ENSG00000228873 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228873 Gene

Genomics for ENSG00000228873 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228873 Gene

Promoters and enhancers for ENSG00000228873 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J096142 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 650.7 +0.8 753 8.2 HDGF PKNOX1 ATF1 SMAD1 SIN3A IRF4 BRCA1 GLIS2 ELK1 ZNF207 DUSP2 ENSG00000228873 PIR52948 GPAT2 ARID5A SNRNP200 CIAO1 TMEM127 KANSL3 GPAT2P1
GH02J096155 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -11.0 -11028 4.2 HDGF PKNOX1 ATF1 SMAD1 YBX1 IRF4 POLR2B ZNF766 ZNF207 ZNF143 ADRA2B KANSL3 SNRNP200 GPAT2 GPAT2P1 ARID5A ZNF514 LMAN2L DUSP2 TMEM127
GH02J096161 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.4 -16428 4.1 HDGF PKNOX1 SMAD1 STAT5A BATF KLF5 IRF4 ZNF143 ATF7 FOS ASTL ADRA2B ITPRIPL1 STARD7-AS1 STARD7 ENSG00000230747 KCNIP3 DUSP2 ARID5A KANSL3
GH02J096167 Enhancer 0.8 ENCODE dbSUPER 0.3 -20.9 -20922 0.8 SCRT1 SMARCA5 PKNOX1 JUNB EBF1 MEF2B SCRT2 IKZF1 ATF7 RUNX3 ASTL DUSP2 ADRA2B STARD7 STARD7-AS1 GC02P096183 ENSG00000228873
GH02J096174 Enhancer 0.8 Ensembl 0.3 -27.5 -27489 0.2 HDGF PKNOX1 IRF4 ZNF48 ZSCAN9 RAD21 RFX5 ARID2 ZNF143 BCLAF1 GC02P096183 ENSG00000228873
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228873 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228873 Gene

Genomic Locations for ENSG00000228873 Gene
chr2:96,145,602-96,147,012
(GRCh38/hg38)
Size:
1,411 bases
Orientation:
Minus strand
chr2:96,811,341-96,812,751
(GRCh37/hg19)
Size:
1,411 bases
Orientation:
Minus strand

Genomic View for ENSG00000228873 Gene

Genes around ENSG00000228873 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228873 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228873 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228873 Gene

Proteins for ENSG00000228873 Gene

Post-translational modifications for ENSG00000228873 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228873 Gene

Domains & Families for ENSG00000228873 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228873 Gene

Function for ENSG00000228873 Gene

Phenotypes From GWAS Catalog for ENSG00000228873 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228873 Gene

Localization for ENSG00000228873 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228873 Gene

Pathways & Interactions for ENSG00000228873 Gene

SuperPathways for ENSG00000228873 Gene

No Data Available

Interacting Proteins for ENSG00000228873 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228873 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228873 Gene

Drugs & Compounds for ENSG00000228873 Gene

No Compound Related Data Available

Transcripts for ENSG00000228873 Gene

mRNA/cDNA for ENSG00000228873 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228873 Gene

No ASD Table

Relevant External Links for ENSG00000228873 Gene

GeneLoc Exon Structure for
ENSG00000228873

Expression for ENSG00000228873 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228873 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228873 Gene

This gene is overexpressed in Bladder (x32.7) and Prostate (x7.5).
genes like me logo Genes that share expression patterns with ENSG00000228873: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228873 Gene

Orthologs for ENSG00000228873 Gene

Evolution for ENSG00000228873 Gene

ENSEMBL:
Gene Tree for ENSG00000228873 (if available)
TreeFam:
Gene Tree for ENSG00000228873 (if available)

No data available for Orthologs for ENSG00000228873 Gene

Paralogs for ENSG00000228873 Gene

No data available for Paralogs for ENSG00000228873 Gene

Variants for ENSG00000228873 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228873 Gene

Disorders for ENSG00000228873 Gene

No disorders were found for ENSG00000228873 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228873 Gene

Publications for ENSG00000228873 Gene

No publications were found for ENSG00000228873 Gene.

Products for ENSG00000228873 Gene

Sources for ENSG00000228873 Gene

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