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Aliases for ENSG00000228838 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000228838 Gene

  • AL355483.2 5

External Ids for ENSG00000228838 Gene

Previous GeneCards Identifiers for ENSG00000228838 Gene

  • GC01P053753

Summaries for ENSG00000228838 Gene

GeneCards Summary for ENSG00000228838 Gene

ENSG00000228838 is an RNA Gene.

Additional gene information for ENSG00000228838 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228838 Gene

Genomics for ENSG00000228838 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228838 Gene

Promoters and enhancers for ENSG00000228838 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J052550 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 44.7 -735.1 -735125 5.6 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 POLR2B CBX5 ZNF207 TUT4 ENSG00000272371 ENSG00000228838 PRPF38A MAGOH ENSG00000266993 CC2D1B RPS13P2 ENSG00000230953 GPX7
GH01J053942 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 44.7 +657.3 657288 5.4 HDGF SMAD1 ARID4B SIN3A YBX1 FEZF1 ZNF2 YY1 POLR2B ZNF766 HSPB11 LRRC42 YIPF1 SSBP3-AS1 MAGOH ENSG00000228838 NDC1 ENSG00000226938 CYB5RL PARS2
GH01J054051 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 44.7 +765.1 765130 3.7 DMAP1 YY1 SLC30A9 E2F8 ZNF416 ZNF143 ZNF548 SP3 NFYC SSRP1 TCEANC2 MIR4781 TMEM59 MAGOH NDC1 ENSG00000228838 HSPB11 SSBP3-AS1 LRRC42 PARS2
GH01J052697 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 44.7 -589.9 -589875 2.2 HDGF FOXA2 PKNOX1 CLOCK SMAD1 MLX ARNT ARID4B SIN3A DMAP1 COA7 GC01P052696 ENSG00000228838 MAGOH TUT4 LOC100652967 ENSG00000226938 TXNDC12-AS1 SLC25A6P3 GAPDHP51
GH01J053889 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 44.7 +602.0 601970 2 HDGF HNRNPUL1 PKNOX1 ARNT ARID4B SIN3A ZNF2 SLC30A9 POLR2B ZNF213 DIO1 YIPF1 GC01P053890 ENSG00000228838 MAGOH SSBP3-AS1 ENSG00000226938 LOC100652967 ENSG00000279049 LRRC42
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000228838 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228838 Gene

Genomic Locations for ENSG00000228838 Gene
chr1:53,288,024-53,289,706
(GRCh38/hg38)
Size:
1,683 bases
Orientation:
Plus strand
chr1:53,753,696-53,755,378
(GRCh37/hg19)

Genomic View for ENSG00000228838 Gene

Genes around ENSG00000228838 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228838 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228838 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228838 Gene

Proteins for ENSG00000228838 Gene

Post-translational modifications for ENSG00000228838 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228838 Gene

Domains & Families for ENSG00000228838 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228838 Gene

Function for ENSG00000228838 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228838 Gene

Localization for ENSG00000228838 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228838 Gene

Pathways & Interactions for ENSG00000228838 Gene

SuperPathways for ENSG00000228838 Gene

No Data Available

Interacting Proteins for ENSG00000228838 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228838 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228838 Gene

Drugs & Compounds for ENSG00000228838 Gene

No Compound Related Data Available

Transcripts for ENSG00000228838 Gene

mRNA/cDNA for ENSG00000228838 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228838 Gene

No ASD Table

Relevant External Links for ENSG00000228838 Gene

GeneLoc Exon Structure for
ENSG00000228838

Expression for ENSG00000228838 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228838 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228838 Gene

This gene is overexpressed in Testis (x9.3).
genes like me logo Genes that share expression patterns with ENSG00000228838: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228838 Gene

Orthologs for ENSG00000228838 Gene

Evolution for ENSG00000228838 Gene

ENSEMBL:
Gene Tree for ENSG00000228838 (if available)
TreeFam:
Gene Tree for ENSG00000228838 (if available)

No data available for Orthologs for ENSG00000228838 Gene

Paralogs for ENSG00000228838 Gene

No data available for Paralogs for ENSG00000228838 Gene

Variants for ENSG00000228838 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228838 Gene

Disorders for ENSG00000228838 Gene

No disorders were found for ENSG00000228838 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228838 Gene

Publications for ENSG00000228838 Gene

No publications were found for ENSG00000228838 Gene.

Products for ENSG00000228838 Gene

Sources for ENSG00000228838 Gene

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