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Aliases for ENSG00000228549 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000228549 Gene

  • Novel Transcript 5
  • BX284668.2 5

External Ids for ENSG00000228549 Gene

Previous GeneCards Identifiers for ENSG00000228549 Gene

  • GC01P017197
  • GC01P016881
  • GC01P016923
  • GC01P016900

Summaries for ENSG00000228549 Gene

GeneCards Summary for ENSG00000228549 Gene

ENSG00000228549 is an RNA Gene.

Additional gene information for ENSG00000228549 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228549 Gene

Genomics for ENSG00000228549 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228549 Gene

Promoters and enhancers for ENSG00000228549 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228549 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228549 Gene

Genomic Locations for ENSG00000228549 Gene
chr1:16,870,945-16,874,092
(GRCh38/hg38)
Size:
3,148 bases
Orientation:
Plus strand
chr1:17,197,440-17,200,587
(GRCh37/hg19)
Size:
3,148 bases
Orientation:
Plus strand

Genomic View for ENSG00000228549 Gene

Genes around ENSG00000228549 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228549 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228549 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228549 Gene

Proteins for ENSG00000228549 Gene

Post-translational modifications for ENSG00000228549 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228549 Gene

Domains & Families for ENSG00000228549 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228549 Gene

Function for ENSG00000228549 Gene

Phenotypes From GWAS Catalog for ENSG00000228549 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228549 Gene

Localization for ENSG00000228549 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228549 Gene

Pathways & Interactions for ENSG00000228549 Gene

PathCards logo

SuperPathways for ENSG00000228549 Gene

No Data Available

Interacting Proteins for ENSG00000228549 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228549 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228549 Gene

Drugs & Compounds for ENSG00000228549 Gene

No Compound Related Data Available

Transcripts for ENSG00000228549 Gene

mRNA/cDNA for ENSG00000228549 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228549 Gene

No ASD Table

Relevant External Links for ENSG00000228549 Gene

GeneLoc Exon Structure for
ENSG00000228549

Expression for ENSG00000228549 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228549 Gene

Orthologs for ENSG00000228549 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000228549 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U1 35
  • 100 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U1 35
  • 58 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia U1 35
  • 55 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm25012 35
  • 51 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U1 35
  • 32 (a)
ManyToMany
chicken
(Gallus gallus)
Aves U1 35
  • 58 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U1 35
  • 52 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii U1 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35
  • 47 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea U1 35
  • 38 (a)
OneToMany
Species where no ortholog for ENSG00000228549 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000228549 Gene

ENSEMBL:
Gene Tree for ENSG00000228549 (if available)
TreeFam:
Gene Tree for ENSG00000228549 (if available)

Paralogs for ENSG00000228549 Gene

No data available for Paralogs for ENSG00000228549 Gene

Variants for ENSG00000228549 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228549 Gene

Disorders for ENSG00000228549 Gene

No disorders were found for ENSG00000228549 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228549 Gene

Publications for ENSG00000228549 Gene

No publications were found for ENSG00000228549 Gene.

No data available for External Links for ENSG00000228549 Gene

Products for ENSG00000228549 Gene

Sources for ENSG00000228549 Gene

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