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Aliases for ENSG00000228541 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000228541 Gene

  • AC093159.1 5

External Ids for ENSG00000228541 Gene

Previous GeneCards Identifiers for ENSG00000228541 Gene

  • GC02P062690

Summaries for ENSG00000228541 Gene

GeneCards Summary for ENSG00000228541 Gene

ENSG00000228541 is an RNA Gene.

Additional gene information for ENSG00000228541 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228541 Gene

Genomics for ENSG00000228541 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228541 Gene

Promoters and enhancers for ENSG00000228541 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J062456 Enhancer 1.2 Ensembl ENCODE 0.7 -4.9 -4936 3.3 HDGF MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 SLC30A9 RPL37P13 TMEM17 ENSG00000226622 EHBP1 ENSG00000228541 GC02M062385
GH02J062467 Enhancer 0.7 Ensembl 0.7 +4.6 4574 1 TFAP4 FOXA2 ERF CEBPG ZNF384 ZIC2 RBPJ RAD21 YY1 EGR1 EHBP1 TMEM17 ENSG00000228541 GC02P062494
GH02J062464 Enhancer 0.6 ENCODE 0.7 +2.7 2725 2.2 MYRF AHR ZNF740 CAVIN1 MAFG GTF2A2 ZNF354B ZNF592 SP1 ZNF316 TMEM17 USP34 XPO1 CCT4 RPL37P13 ENSG00000236498 ENSG00000226622 EHBP1 ENSG00000228541 GC02P062494
GH02J062473 Enhancer 1 Ensembl ENCODE 0.4 +13.0 13047 5.4 ELF3 MLX ARID4B DMAP1 BATF RAD21 ZNF614 RCOR1 MIXL1 RXRA TMEM17 RPL37P13 ENSG00000226622 EHBP1 CCT4 COMMD1 ENSG00000228541 GC02P062494
GH02J062450 Enhancer 0.9 ENCODE 0.4 -12.2 -12166 0.1 ELF3 FOXA2 MLX DMAP1 ZNF48 RAD21 RARA YY1 EGR1 CREM EHBP1 ENSG00000226622 CCT4 COMMD1 ENSG00000228541 TMEM17 GC02M062385
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228541 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228541 Gene

Genomic Locations for ENSG00000228541 Gene
chr2:62,463,127-62,464,070
(GRCh38/hg38)
Size:
944 bases
Orientation:
Plus strand
chr2:62,690,262-62,691,205
(GRCh37/hg19)
Size:
944 bases
Orientation:
Plus strand

Genomic View for ENSG00000228541 Gene

Genes around ENSG00000228541 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228541 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228541 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228541 Gene

Proteins for ENSG00000228541 Gene

Post-translational modifications for ENSG00000228541 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228541 Gene

Domains & Families for ENSG00000228541 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228541 Gene

Function for ENSG00000228541 Gene

Phenotypes From GWAS Catalog for ENSG00000228541 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228541 Gene

Localization for ENSG00000228541 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228541 Gene

Pathways & Interactions for ENSG00000228541 Gene

SuperPathways for ENSG00000228541 Gene

No Data Available

Interacting Proteins for ENSG00000228541 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228541 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228541 Gene

Drugs & Compounds for ENSG00000228541 Gene

No Compound Related Data Available

Transcripts for ENSG00000228541 Gene

mRNA/cDNA for ENSG00000228541 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228541 Gene

No ASD Table

Relevant External Links for ENSG00000228541 Gene

GeneLoc Exon Structure for
ENSG00000228541

Expression for ENSG00000228541 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228541 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228541 Gene

This gene is overexpressed in Vagina (x7.0), Skin - Not Sun Exposed (Suprapubic) (x6.4), Skin - Sun Exposed (Lower leg) (x6.0), Esophagus - Mucosa (x4.9), Minor Salivary Gland (x4.2), and Brain - Spinal cord (cervical c-1) (x4.2).
genes like me logo Genes that share expression patterns with ENSG00000228541: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228541 Gene

Orthologs for ENSG00000228541 Gene

Evolution for ENSG00000228541 Gene

ENSEMBL:
Gene Tree for ENSG00000228541 (if available)
TreeFam:
Gene Tree for ENSG00000228541 (if available)

No data available for Orthologs for ENSG00000228541 Gene

Paralogs for ENSG00000228541 Gene

No data available for Paralogs for ENSG00000228541 Gene

Variants for ENSG00000228541 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228541 Gene

Disorders for ENSG00000228541 Gene

No disorders were found for ENSG00000228541 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228541 Gene

Publications for ENSG00000228541 Gene

No publications were found for ENSG00000228541 Gene.

Products for ENSG00000228541 Gene

Sources for ENSG00000228541 Gene

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